Verticillium alfalfae: VDBG_05923
Help
Entry
VDBG_05923 CDS
T02227
Name
(RefSeq) multidrug resistance protein CDR1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
val
Verticillium alfalfae
Pathway
val02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
val00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VDBG_05923
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
val02000
]
VDBG_05923
Transporters [BR:
val02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
VDBG_05923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_CDR
ABC_trans_N
ABC2_membrane_7
AAA_25
RsgA_GTPase
AAA_33
AAA_16
AAA_29
AAA_21
AAA_18
ABC2_membrane_3
AAA_17
AAA_22
SMC_N
AAA_30
DUF5826
Motif
Other DBs
NCBI-GeneID:
9537775
NCBI-ProteinID:
XP_003003481
UniProt:
C9SLZ9
LinkDB
All DBs
AA seq
1434 aa
AA seq
DB search
MSPPEAGVRNGAVPTNQNQQGATPTDTQSEGTGVEDIYPQPNEVADDGLSQEECMEEEIT
QLARRFTSHSQHQPSLFPLPTNGPLNPESPDFNPRKWAKAFFALRRGCGDGVPPRTTGIA
FRDLSVYGFGTATDYQKTVGNLALEGVTVFKKLLLQQKQQRIDILHNLEGVVHNGEMLAV
LGPPGSGCSTLLRTIAGDTHGFHVSDDTTINYQGIRAEQMKTAFRGEAIYTAEVDAHFPH
MTVGDTLYFAALARCPKTIPDGVSRSEYAEHLRDVTMAMFGISHTKNTRVGDDFIRGVSG
GERKRVTISEAALSHSPLQCWDNIIVLYEGRQIFFGRTEEAKAYFEGLGFICPERQTTAD
FLTSMTSHQERVVRPGCNTPRSPDEFADAWRQSEHRLRLVNEIDNYLDQHPFNGKHYNSF
LASRRSDQATSQRESSPFTLSYWQQVKLTLWRSWVLLKSDPSMTLTMLVTNIFMALVMSS
IFYNMPNDSSSISRRGTLMFFIVLTNAFGSMLEIMTLYAKRPIVEKHNRYALYHPSAEAL
AAMIVDLPYKTVNSILTNLAIYFMCNLRREVGPFFFFFLVIYIVTLTMSMMFRLMGSLTK
TIAQALAPASVILLVICLYTGFAIRIQYMQVWLGWLRWINPVQYGFESLLVNEFVGRAFR
CVAFVPAGPDYGSVEPSQRVCTVAGSTPGSDSIEGAAYINASYGYQSANRWRNVGIMIVF
GIAFMVGHLVAAEYVASERSKGEVLVFRRKAISSRGQKAQDIESGSSNRPSDKNPNAGYS
SGDAANMERATSIFHWKDICYDIKIKDEPRRILDNVDGWVKPGTLTALMGVSGAGKTTLL
DVLASRVTMGVISGSMLVDGNPRDASFQRQTGYVQQQDLHLHTSTVREALSFSAMLRQSS
KYSRQEKLDYVDTVIGLLDMQQYADAVIGVPGEGLNVEQRKRLTIGVELAARPQLLLFLD
EPTSGLDSQTSWSVCNLMEKLTNSGQAILCTIHQPSAILFQRFDRLLLLARGGRTVYFGP
IGKNSQTLNDYFVRNGGPACTPEANPAEHMLHVIGAAPGTHSEIDWPDVWRRSPEYRGVQ
DELERLEAGRRPIEENQDLSKFSEFAVPLSLQYREVCWRVFQQYWRSPSYLMSKAFLSCG
AALFIGLSFLNIKNTQDGLQNQIFGVFIFLTVFSQLVDQILPIFVSQRTMYEARERPSKT
YSWVAFLGANMLVEAFWNSLLSVLSYILWYFPMGLYQNARQTGAEHSRGVTVFLFVWVFF
LFSSTFAHLIIAGLDSFEVAGGVVGLITVLMFSFCGILAGPKVLPGFWIFMYRVNPFTYF
VEGFLGTALANAAAICSDNEYVSFNVPNGSTCGEYMQSYLEIAGGFVEDPDSTGRCRFCA
IADTNTFLSGINVDFANRWRNFGFMWVFIVFNVVVATALYWLARVPKKSKVKSE
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgccggaagcaggggtccgaaacggtgccgttccaacgaatcaaaaccaacag
ggagcgactcccacggatacgcaatctgaaggaacgggcgtcgaagacatatacccccag
cccaatgaagtcgccgacgatggcttaagccaggaagagtgcatggaagaagagatcact
cagcttgctcgccgatttacctcccactctcaacaccagccgtcgctcttcccgcttcca
actaatggccccctgaaccctgaaagccccgacttcaaccccagaaaatgggccaaggcc
tttttcgccctacgcaggggttgtggtgacggcgtgccccctcgaaccactggcatagcc
tttcgggaccttagcgtctacggcttcggaacggcgacggactatcaaaagacggttggc
aacctcgcacttgagggcgtcacagttttcaagaaacttctgctgcagcagaagcagcag
cgaatcgatattttacataacctcgaaggcgtcgtacacaacggtgagatgcttgctgtg
cttggcccccctggttcaggctgctcgacgcttctgcgcaccatcgccggagacacccat
gggttccacgtcagcgacgataccaccatcaactatcagggtatacgagcggagcaaatg
aagactgcgttccgaggcgaagcgatctatactgccgaggttgatgcccattttccccac
atgaccgtgggagataccctttacttcgcagcactcgctcgttgtcccaagacaattcca
gacggcgtctctcgcagcgagtatgcagagcatctgcgtgatgttactatggccatgttc
ggaatttctcacaccaaaaacacacgtgtcggagatgatttcatccgaggtgtcagcggt
ggtgagagaaagcgagttacgatatcggaggccgccctcagccactcgccgttgcagtgc
tgggacaatattattgttctatacgaaggtcggcagatattctttggccgaacggaagag
gcgaaagcctatttcgaagggcttgggtttatctgtccagaacgtcagacgacagccgat
ttcctcacatcaatgaccagccatcaggaacgcgttgtacgacctggctgcaataccccg
cgcagccccgacgagttcgccgacgcatggagacagagtgagcaccgacttcggctcgtg
aacgagatcgataactaccttgaccagcatcctttcaacggcaagcattacaatagcttc
ctggcctcgcgccggagtgatcaggcaacttcccagcgcgagagctctcccttcactcta
tcgtattggcaacaagtgaagctcactttatggcgtagctgggttctgctcaagagcgat
ccgagtatgactttgaccatgctcgtcaccaacatcttcatggcccttgtcatgtcctcc
atcttctacaacatgccgaacgactccagcagcatttcaaggcgtggtactctcatgttt
ttcatcgtcctgactaatgcctttggcagtatgttggaaattatgactctctatgctaaa
aggcctattgtcgaaaagcataaccgatacgccctataccatccgagtgccgaagcctta
gcggctatgattgtcgatttaccctacaagacggttaattcgattttgactaacctcgcg
atctatttcatgtgtaatttacgacgtgaggtcgggccgttctttttcttcttcctggtc
atctacatcgtaacacttaccatgtcgatgatgttcaggcttatgggttccctcacgaaa
actattgcgcaagctctagcaccggcctctgtcatcctacttgttatctgtctgtacacc
gggttcgccatcagaatccaatacatgcaggtctggctaggctggctacgctggattaac
cctgtccagtatggatttgagagcctgcttgtgaacgagttcgtcggacgcgcatttcgc
tgcgtcgcgtttgtgccagccggccccgactatggatccgtcgagcccagccagcgcgtc
tgcaccgtcgccggctcgacccctggctcggactccattgagggcgccgcgtatatcaat
gcttcgtatggatatcagagcgccaacaggtggcgcaacgtcggtatcatgatcgtcttt
ggcatcgccttcatggttggacacctggtagccgcggagtacgtggcttcggaacgatct
aagggggaggtcttggtcttcaggcgcaaagcgataagctcgcggggacaaaaagctcag
gacatcgagagtgggtcgagcaatcgtccaagcgacaagaatcccaacgctggctattcc
tctggggacgccgcaaacatggaaagggctacatcaatattccattggaaggacatctgt
tacgacattaagattaaggacgagccgcgcaggattctggataacgttgatggctgggtc
aaacccggaactttgacggcactcatgggagtttctggtgcgggtaaaacaacgcttcta
gatgtcttggcgagccgagtgaccatgggcgtcatctcaggaagcatgctggtggacgga
aaccctcgggatgcttcgttccagcgtcaaacgggatacgtccagcagcaagacttacac
ctacatacttcgaccgttcgagaggctctatccttcagcgccatgctacggcagtcttcg
aaatactcacgccaggaaaagctggattacgtcgacactgtcatcggtctcctggatatg
cagcagtatgccgacgccgtgatcggtgtccctggcgagggccttaacgtcgaacaacgc
aagagactcactattggggtcgaattagctgcaagacctcagcttcttcttttcctcgac
gaacctacctcaggcctcgatagccagacctcgtggtcagtctgcaacctaatggagaag
cttaccaacagcggccaggctatcctctgcacgattcatcagccctcggctatcctgttc
cagcgttttgataggcttcttctcctcgcccgggggggtcgcacagtttactttggtcct
atcgggaagaactcccagactctgaacgattacttcgtccgcaacggtggtcctgcctgc
acaccggaggccaaccctgcagagcacatgttacatgtgattggtgcagctccgggaaca
cacagcgagatcgattggccggatgtttggcgacgcagcccagagtaccgaggcgtacag
gatgagctcgagagattggaagccggtcgtcgccctatcgaagaaaatcaggacttatct
aagttttcggagttcgctgtgcccttgagtctgcaatatagggaagtttgctggcgcgtc
ttccagcagtattggcgcagcccatcatacctaatgtccaaagccttcctatcctgtgga
gctgctctattcattggcttatcttttctaaacattaaaaacactcaggacggccttcaa
aaccaaatctttggagtgttcatcttcctcacagttttcagtcagctcgtcgaccaaatc
ctacctattttcgtttctcagcgaaccatgtacgaggctcgcgagcgcccatccaagacg
tactcttgggtggccttccttggcgcgaacatgctcgttgaagcattttggaactcactt
ctttcagtattgagctacatactatggtacttcccaatgggcctttaccagaacgcccga
caaactggtgcggaacattcccgtggtgtgacggtgttccttttcgtttgggtatttttc
ctcttctcaagcacctttgcccacctcattattgccggcctagacagctttgaggtggct
ggaggcgtcgtcggtctcatcaccgttctgatgttctctttctgcggtatcttggccggc
cccaaagtcctgcctggtttctggatctttatgtaccgtgtcaacccattcacatacttc
gtcgaaggcttcctgggcacggcgcttgcaaatgcagcggccatctgctctgacaacgag
tacgtctctttcaacgtcccgaacggaagcacctgcggcgagtacatgcagtcatacctt
gagatagccggaggcttcgtcgaggaccctgatagtactggccggtgccgattttgtgcc
attgccgacacgaatacgttcctttctggcatcaatgtggactttgcaaacaggtggcgc
aattttggcttcatgtgggtgttcatcgtcttcaacgtggttgtcgcaacggcactatat
tggctggctcgtgtgcccaaaaagtccaaggtaaagagtgagtaa
DBGET
integrated database retrieval system
