Verticillium alfalfae: VDBG_05952
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Entry
VDBG_05952 CDS
T02227
Name
(RefSeq) peroxisomal biogenesis factor 6
KO
K13339
peroxin-6
Organism
val
Verticillium alfalfae
Pathway
val04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
val00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VDBG_05952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_05952
Membrane trafficking [BR:
val04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
VDBG_05952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Parvo_NS1
RuvB_N
AAA_16
nSTAND3
AAA_2
Mg_chelatase
AAA_28
RNA_helicase
AAA_25
TIP49
AAA_14
AAA_22
AAA_5
IstB_IS21
ATPase
AAA_lid_3
AAA_7
AAA_17
TsaE
PhoH
ABC_tran
PPV_E1_C
NPHP3_N
ResIII
DUF815
AAA_33
AAA_24
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
9536309
NCBI-ProteinID:
XP_003003510
UniProt:
C9SM28
LinkDB
All DBs
AA seq
413 aa
AA seq
DB search
MPCSTQRPQELCWCHWRTQDPNVTWDDVGGLQYVKDAVKETIQLPLERPELFAKGLKKRS
GILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQKARDARPC
VVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGSDGGGGVFVIGATNRPDLL
DPALLRPGRFDKMLYLSVADTRETQLKILEAVTRKFTLHPSLSLDRVASQLPYHYTGADY
YALCSDAMLKAITRQTSSVDAKVAAINAARGPDQHPISTANFFDHHATAEDIAVVVTEED
FLAADRELVPSVSAGELARYETMRRSFEGPAQKEGQGADVTRPGGGAARAVSGESVASSK
GKGKAPARDKGKGKALAVDSDDDEDRAPNGRVNKGKGKAAFQHGTADDDDELY
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgccctgcagcacgcagcgcccgcaagaactttgctggtgccattggcgcacccaagat
cccaacgtcacctgggacgacgtgggtggcctgcaatacgtcaaggacgctgtcaaggag
actatccaactgcccctcgagaggccggagctgttcgccaaggggctcaagaagcgctcc
ggcattttgttctacggccctcccggaacgggcaagacgctcctcgccaaggccatcgcc
accgagtacagcctcaactttttcagcgtcaagggccccgagctgctcaacatgtacatt
ggtgagtcggaggccaacgtgcgccgcgtcttccaaaaggcgagagacgcgcgcccttgc
gttgtcttcttcgacgagctcgactcggtcgcgcccaagcgtggcaaccagggagacagt
ggcggcgtcatggaccgcatcgtgtcgcagctcctcgctgagctcgacggcatgtcgggc
ggcagcgatggcggcggcggcgtcttcgtcattggcgcgaccaacaggcctgacttgctg
gatccggcactgctgcgaccaggccgcttcgacaagatgctgtaccttagtgtagccgac
acgcgggagacgcagctcaagatccttgaggctgtcacccgcaagttcaccctccatccc
tcactctcgctcgatcgcgtcgcctcccagctgccctaccactacacgggcgcagattac
tacgctctttgcagcgacgccatgctcaaggctatcacacgccagacgtcgtccgtcgac
gccaaggtggcggccatcaacgcagcacgcggcccagaccagcaccccatttcgacggcc
aactttttcgaccaccacgccacggccgaggatattgctgtcgtcgtgacggaagaggac
ttcctcgccgccgacagggagctcgtgccgtccgtcagcgcgggcgagctggcgcggtat
gagacgatgaggcggtcgttcgagggcccggcgcagaaggaaggacagggggctgacgtc
acgagaccaggcggcggtgctgcgagggccgtatctggcgagtcggtcgccagttccaaa
gggaagggcaaggcgccagcgcgggacaagggcaaggggaaagcgctggcggtggacagc
gacgatgacgaggatcgagcccccaacggccgcgtcaacaagggcaagggcaaagctgcc
tttcagcacgggacggcggatgatgatgacgagctgtactga
DBGET
integrated database retrieval system