KEGG   Verticillium alfalfae: VDBG_05952
Entry
VDBG_05952        CDS       T02227                                 
Name
(RefSeq) peroxisomal biogenesis factor 6
  KO
K13339  peroxin-6
Organism
val  Verticillium alfalfae
Pathway
val04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:val00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    VDBG_05952
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:val04131]
    VDBG_05952
Membrane trafficking [BR:val04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    VDBG_05952
SSDB
Motif
Pfam: AAA Parvo_NS1 RuvB_N AAA_16 nSTAND3 AAA_2 Mg_chelatase AAA_28 RNA_helicase AAA_25 TIP49 AAA_14 AAA_22 AAA_5 IstB_IS21 ATPase AAA_lid_3 AAA_7 AAA_17 TsaE PhoH ABC_tran PPV_E1_C NPHP3_N ResIII DUF815 AAA_33 AAA_24 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 9536309
NCBI-ProteinID: XP_003003510
UniProt: C9SM28
LinkDB
AA seq 413 aa
MPCSTQRPQELCWCHWRTQDPNVTWDDVGGLQYVKDAVKETIQLPLERPELFAKGLKKRS
GILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQKARDARPC
VVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGSDGGGGVFVIGATNRPDLL
DPALLRPGRFDKMLYLSVADTRETQLKILEAVTRKFTLHPSLSLDRVASQLPYHYTGADY
YALCSDAMLKAITRQTSSVDAKVAAINAARGPDQHPISTANFFDHHATAEDIAVVVTEED
FLAADRELVPSVSAGELARYETMRRSFEGPAQKEGQGADVTRPGGGAARAVSGESVASSK
GKGKAPARDKGKGKALAVDSDDDEDRAPNGRVNKGKGKAAFQHGTADDDDELY
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgccctgcagcacgcagcgcccgcaagaactttgctggtgccattggcgcacccaagat
cccaacgtcacctgggacgacgtgggtggcctgcaatacgtcaaggacgctgtcaaggag
actatccaactgcccctcgagaggccggagctgttcgccaaggggctcaagaagcgctcc
ggcattttgttctacggccctcccggaacgggcaagacgctcctcgccaaggccatcgcc
accgagtacagcctcaactttttcagcgtcaagggccccgagctgctcaacatgtacatt
ggtgagtcggaggccaacgtgcgccgcgtcttccaaaaggcgagagacgcgcgcccttgc
gttgtcttcttcgacgagctcgactcggtcgcgcccaagcgtggcaaccagggagacagt
ggcggcgtcatggaccgcatcgtgtcgcagctcctcgctgagctcgacggcatgtcgggc
ggcagcgatggcggcggcggcgtcttcgtcattggcgcgaccaacaggcctgacttgctg
gatccggcactgctgcgaccaggccgcttcgacaagatgctgtaccttagtgtagccgac
acgcgggagacgcagctcaagatccttgaggctgtcacccgcaagttcaccctccatccc
tcactctcgctcgatcgcgtcgcctcccagctgccctaccactacacgggcgcagattac
tacgctctttgcagcgacgccatgctcaaggctatcacacgccagacgtcgtccgtcgac
gccaaggtggcggccatcaacgcagcacgcggcccagaccagcaccccatttcgacggcc
aactttttcgaccaccacgccacggccgaggatattgctgtcgtcgtgacggaagaggac
ttcctcgccgccgacagggagctcgtgccgtccgtcagcgcgggcgagctggcgcggtat
gagacgatgaggcggtcgttcgagggcccggcgcagaaggaaggacagggggctgacgtc
acgagaccaggcggcggtgctgcgagggccgtatctggcgagtcggtcgccagttccaaa
gggaagggcaaggcgccagcgcgggacaagggcaaggggaaagcgctggcggtggacagc
gacgatgacgaggatcgagcccccaacggccgcgtcaacaagggcaagggcaaagctgcc
tttcagcacgggacggcggatgatgatgacgagctgtactga

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