Verticillium alfalfae: VDBG_06033
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Entry
VDBG_06033 CDS
T02227
Name
(RefSeq) crossover junction endonuclease MUS81
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
val
Verticillium alfalfae
Pathway
val03440
Homologous recombination
val03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VDBG_06033
03460 Fanconi anemia pathway
VDBG_06033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_06033
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
VDBG_06033
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
HHH_8
WHD_MUS81
Motif
Other DBs
NCBI-GeneID:
9534691
NCBI-ProteinID:
XP_003003591
UniProt:
C9SMA9
LinkDB
All DBs
AA seq
591 aa
AA seq
DB search
MGEHDQYANPLLLDWVKEWLDTARERNSKGVTTYKNAYESLKACPLAFEHPQQLVQLKGF
GEKMSSRLTDRMKKHCEQNGLPMPERPRKNRNAGETQDGEGEGEGSAAPKKTRKPKPYVP
AYRSGAYALVLALATLGEDATSGMTKADLVDKAQEHSDSSFTAPSDPTKFYTAWNSMKTL
LDKEFVYERGRPLRRYALTDEGWEVARRIQQTTTGGGGPSGAASAADAPQAAHESGGAPA
PINTAESTGALPRTEAGRSAETAPQASYEGVVGNGSVSAGDSLPHFTPIELAPGSFTVHL
LLDVREIRATKDRDYLQEELIKKGVKPIMRSLDVGDAQWIAKTHDATALTAHGAEGDEVV
LDWIVERKRLDDLVSSIKDGRFHEQKFRLRKSGVQNVIYIVEEIAMDSNHFSKYEESVQS
AVASTQVVNGYFLKKTQKVDDTIRYLARMTVLLKKLYESKPLLVIPTKVLTAQNYLPLLA
HLREKEPERGYYISYPAFASLASKSDMMTLRDVYLKMLMTTRGVTGEKALEIQKRWKTPH
DFVKAFAACGTGEQGLKRKREMVSNGLAHMVGRKKIAKAVSQRIAEVWGDA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggggaacatgatcaatacgccaacccccttctcctggactgggtcaaggaatggctc
gacacggccagggagcgcaactcaaaaggcgtcacgacatacaaaaacgcctacgagtcc
ctgaaagcatgtcccctggccttcgaacacccccagcagctggtccagctcaagggcttc
ggcgagaaaatgtcgtcgcggctgacggatcgcatgaagaaacactgcgagcagaacggc
ctgccgatgcctgagcgtccccggaagaacaggaacgccggcgagacgcaggatggcgag
ggcgagggcgagggctcggcggcgcccaagaagacgagaaagccgaaaccgtacgttcct
gcctatcgatccggcgcgtatgctctcgtcctggccctcgccactctcggtgaagacgcc
acgtcgggcatgaccaaggccgatctcgtcgacaaggcgcaggagcacagcgactcgtct
ttcacggcaccgagcgatcccaccaagttctacacggcgtggaactcaatgaagacgctg
ctggataaggagtttgtctatgagagaggccggccgctgcgaaggtacgccttgacggat
gaaggctgggaggttgcgcggcggatccagcagaccacaacgggcggcgggggaccatct
ggggccgccagcgccgccgacgcgccccaggcggcacatgaaagtggcggggcaccagca
ccgatcaacacagcagagtccacgggagcactgccgcgcaccgaagcaggcaggtccgcg
gaaaccgcccctcaagcttcttacgagggcgtcgtgggtaacgggtccgtctccgctggt
gatagcctcccccattttacccctatcgagctcgcccccggatccttcacggttcacctc
ctcctcgacgtccgcgaaatccgcgccacaaaagaccgagactatctgcaagaggagctc
atcaaaaagggcgtcaagcccatcatgcgttccctcgacgtcggcgacgcgcagtggatc
gccaaaacccacgacgctacagccctgactgcccacggtgccgaaggcgacgaggttgtt
ctcgactggatcgtcgagcgcaaacgtctcgacgaccttgtcagcagtatcaaagatggt
cggttccacgagcaaaagttccgcctccgcaagtccggagttcagaacgtcatttacatt
gtcgaggagatcgccatggactcgaaccacttctccaagtacgaggagtcggtgcagtcg
gcggtggcgtcgacgcaggtggtgaacggctactttctcaaaaagacgcagaaggtggac
gacacgatccggtaccttgccaggatgacggtcctgctgaagaagctgtacgagagcaag
ccgctgttggtgataccgaccaaggtgctcacggcgcagaactaccttcccctgctggcg
cacctccgagagaaggagccggagaggggctactacatcagctacccagcatttgcatct
ctggcctccaagtcggacatgatgacgctgagggacgtctatctgaagatgctcatgacg
acgaggggtgtcactggcgaaaaggctctcgagatacagaagcggtggaaaacaccgcac
gattttgtcaaggcatttgcggcgtgtgggaccggcgaacagggtctcaagaggaagcgc
gaaatggtgtcaaacggcttggcccatatggtgggaaggaagaagattgccaaggccgtc
agccagcggattgccgaggtatggggggacgcatga
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