Verticillium alfalfae: VDBG_06170
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Entry
VDBG_06170 CDS
T02227
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
val
Verticillium alfalfae
Pathway
val03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VDBG_06170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_06170
03009 Ribosome biogenesis [BR:
val03009
]
VDBG_06170
Messenger RNA biogenesis [BR:
val03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VDBG_06170
Ribosome biogenesis [BR:
val03009
]
Eukaryotic type
Pre-60S particles
RNases
VDBG_06170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
9534830
NCBI-ProteinID:
XP_003003728
UniProt:
C9SMP6
LinkDB
All DBs
AA seq
212 aa
AA seq
DB search
MGTEKGSRRIGRNDDMTGLDPDTEEILEIHCIITTGNLEPLDGPGWGVVVHQPASRLDQM
GEWCTDMHAKTGLTEAVLASTTTPQQAAEGLLAHIRKYVPTPKVGLLAGNTVHADRGFLA
KQPYTPIVEHLHHRIVDVSSLKEAAKRWCPREIVEGAPVKTGTHRGREDIKESIAEARYY
REVIFGATWSQGRETLATEPTSDDEQWANNLM
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggggacggagaaaggctcaagaagaatcggtcgaaatgatgatatgacgggccttgac
cctgacacggaggagatcctcgagatccactgcatcatcacgacaggcaacctcgagccg
ctcgacggccccggctggggtgtcgtcgtccaccagccggcgtcgcgactcgaccaaatg
ggcgagtggtgcactgacatgcacgccaagacgggcctcacggaggcagtccttgcctcg
acgacgacgcctcagcaggcggcggagggcctgctggcgcacatcagaaagtacgtgcca
acgccgaaggtgggcctgctcgcaggtaacacggtgcatgcggatcgaggctttctggcc
aaacaaccgtacacgcccattgtcgagcacttacatcatcgaatcgtagatgtcagcagt
ctcaaggaggcagcgaagcgatggtgtccgagagagatagtcgagggggcgccggtcaag
acagggacgcatcgcggaagggaggacatcaaagaaagtatcgccgaggcacgatactat
cgtgaagtcatcttcggcgccacgtggagtcagggccgggagactttggctacggagccg
acaagcgacgatgaacaatgggcgaacaacttgatgtag
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