Verticillium alfalfae: VDBG_06212
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Entry
VDBG_06212 CDS
T02227
Name
(RefSeq) vacuolar protein sorting-associated protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
val
Verticillium alfalfae
Pathway
val04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
val00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
VDBG_06212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_06212
Membrane trafficking [BR:
val04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
VDBG_06212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
RIH_assoc
Motif
Other DBs
NCBI-GeneID:
9534953
NCBI-ProteinID:
XP_003003770
UniProt:
C9SMT8
LinkDB
All DBs
AA seq
857 aa
AA seq
DB search
MSATPAPPEDQARLLEDALVAVRQQTAVMRKCLDSPGKLMDALKCCSTLVSELRTSSLGP
KQYYELYMAVFDALRYLSVHLRENHPVNHLADLYELVQYAGNIVPRLYLMMTVGTAYMSI
EDAPVKELMKDMMDMSRGVQHPIRGLFLRYFLSGQARDFLPTGDGDGPEGNLSDSINFVL
TNFVEMNKLWVRLQHQGHSREREQRTRERKELQLLVGSNIVRLSQLVDLETYKSGILAPL
LEQVVQCRDVLAQEYLLEVVTQVFPDEFHLHTLDQFLGAVSRLNPHVNVKAIVIGLMDRL
SDYAEREGPAEGDDDKAKVEEEALAKLLDKVKLQSEAPESAAPTDADADTSKPSDTNGNE
SSGADDADGEADASKASDAADDETTPSVAETDTTAVNGSETAAESSEAPDATKTPTEKGI
PDNVQLYEVFFSQVKNLVEAQHLPIPDTIALLHSLTNLALNIYPERLDFVNQILEYALSK
AQSYQTRRAVAGEVARNLLRNQTRISTSSQLDNVLEILKVLIKEGSQPPSNYPGVQQRRA
METDETLEEQGWLARLVHLINAESNDTQFKLLQATRKAYSEGNERIRTTTPPLITACMKL
ARRLKAREHLDDNWETQSNALFKFMHSALSTLYTRVSGPGAAELALRLFCSSGMTADQAG
FEEVSYEFFAQAFTVYEEAVSDSKAQFQAVCIIASSLHQTRNFGKENYDTLITKCAQHGS
KLLRKPDQCRAVYLASHLWWAMPSQANGETDETDLYRDGKRVLECLQRALRVADSCMETA
ASIELFVEILDRYVYYFDQQNEAVTTKYLNGLIELIHSNLAGNQQDSASIDNSKRHFYST
LENIRSRQYEGVVLYPK
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgacgcccgcgccgcctgaggaccaggcacgcctgctggaggatgctctagtt
gctgtgcgccagcaaacggcggttatgcggaaatgcctggattcgcccggcaagctcatg
gacgcactcaagtgctgctctaccctcgtctccgagctccgaacgagcagcctcggcccc
aagcaatattacgagctctacatggccgtcttcgacgcgctgcggtacttgtccgtccac
ctgcgagagaaccaccccgtcaaccacctggccgacctgtacgagctcgtccagtacgcc
ggaaacattgtgcctcgtctctacctcatgatgaccgtcggcacagcctacatgtcgatt
gaagacgcgccggtcaaggagctgatgaaggacatgatggacatgagccgcggggttcag
catcccatccgcggtcttttcctgcgatacttcctctccggccaggcccgcgacttcctg
cccaccggcgacggcgacggccccgaaggcaacctctccgactcgatcaactttgtcctc
accaactttgtcgagatgaacaagctgtgggtgcgcctccagcaccagggccactcgcgc
gagagggaacagaggacgagggagcgcaaggagctgcagctgctcgtcggcagcaacatt
gtgcgcctgagccagctcgtcgacctcgagacgtacaagtcgggcatcctggcgccgctg
ctcgagcaggttgtgcagtgccgcgatgtcctggcgcaagagtacctcctcgaggtcgtc
acccaggtcttccccgacgagttccacctccacaccctcgaccagttccttggcgccgtc
tcgcgcctcaacccccatgtcaatgtcaaggcgattgtcattggcttgatggacagactt
tcagactacgccgagcgcgaaggccccgccgagggcgacgatgacaaggcaaaggtggag
gaggaggcattggcgaagctgctagacaaggtgaagctgcagagcgaggcgccagagtcg
gcggcaccaacagatgcggatgccgacaccagcaagccgtccgacacaaatggcaacgaa
tcttcgggggccgacgacgccgacggagaagcggatgcctcgaaagctagcgatgccgcc
gatgacgagacgacgccgtctgttgcagagaccgatacaacggccgtcaatggctccgaa
accgccgctgagtcttccgaagctccggacgcaaccaagacgccgacggagaagggcatt
cccgacaatgtgcagctttacgaggtgttcttcagccaggtgaagaacctggtcgaggcg
caacacctccccattcccgacacaatcgcgttgctgcactcgctgacgaacctggccttg
aacatctaccccgagcgcctcgattttgtcaaccagatactcgaatacgccctcagcaaa
gcgcagtcctaccagacccgacgcgctgttgctggcgaggtagcgcgcaacctgctccgc
aaccagaccaggatatcaacctcgtcccagctggataacgtcttagagatcctcaaggtc
ctcatcaaggagggctctcagccgccgtccaattaccccggcgttcagcagcgtcgtgct
atggagacggacgagactctcgaggagcaaggctggctcgcgcgcctcgtgcatctcatc
aacgccgagagcaacgacacacagtttaagctcctccaggcgacacggaaggcctactcc
gagggcaacgagcgtatccgtaccacaactcctcctcttatcacagcgtgtatgaagctt
gctcgcaggttgaaggcgagggaacacctcgacgacaactgggagacgcagagcaatgcc
ttgttcaagttcatgcattccgcactgagcactctctacacgcgtgtcagcggcccggga
gcggcagagctcgccctgcgcctcttctgctcttctggcatgacggctgaccaagctggg
ttcgaagaggtgtcctacgagttcttcgcacaagccttcaccgtctacgaggaggctgtt
tctgattccaaagcccagttccaggccgtctgcatcattgccagctcgcttcaccagacc
aggaactttggcaaggagaactacgatactctcatcaccaagtgtgcgcagcacggcagc
aagctgttgaggaagcccgaccagtgccgtgccgtctatctggcaagccacctctggtgg
gccatgcccagccaggccaatggcgagacggacgagacggacctttaccgcgacggcaag
cgcgtgctcgagtgcctccaacgcgccctccgcgtggccgactcctgcatggagacggcc
gcctctattgagctttttgttgaaattcttgaccgctatgtctactactttgaccagcaa
aacgaggccgtcacgaccaaatacctcaacggcctcattgagctcatccactccaacctc
gccggcaaccagcaggattcggcgtcgatcgacaacagcaagcgccacttttactcgacg
ctcgaaaacattcggagtaggcagtacgagggtgtcgtattgtacccgaaatga
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