Verticillium alfalfae: VDBG_06322
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Entry
VDBG_06322 CDS
T02227
Name
(RefSeq) vacuolar protein sorting-associated protein
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_06322
Membrane trafficking [BR:
val04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
VDBG_06322
Protein recycling
Other Rab GTPase associated proteins
VDBG_06322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5601
VPS9
CUE
Motif
Other DBs
NCBI-GeneID:
9535227
NCBI-ProteinID:
XP_003003879
UniProt:
C9SN47
LinkDB
All DBs
AA seq
736 aa
AA seq
DB search
MPDEQGSGKPSSDAPEKVQALDDLIDLTDKTEPTASASVAADASKPSSPSNHSKDAEATV
SRAHVVTEADPDGEASASADLMNASVATIKPSKPLPADTSTQFLTIETKAYVDPTPPTPT
ASRPPSRTPSSVGSRQDASPTRSDAAYDDRRYTSDDDQENGSRSEIQSIMEQFTGDGGGP
GAEEVMSPRLEITSPILGGPIQHPPRKSSLEPLSTSFSAQSLEKETLGAAIPSSPVSTRS
RTRSSVDFGPPVPPKDGLPGAEDSQTSLDTPMSPSAMHRPPPPEPEPEPTLPFDFHRFLE
QLRNKKADPVARYLKSFLSEFGKRQWMVHEQVKIIGDFLAFIANKMAQCEVWRDVSDAEF
DNAREGMEKLVMNRLYTQTFSPAIPAPQPIPGAKPKRRGGERPMGPGRKGQHQEDVERDD
ILTQKINIYGWIREAHLDIPPTSESGKRFLKLAQQGLLKHAKSDGSADSFMPFLIYVVLQ
SNPEHLVSNVQYILRFRNQEKLGGEAGYYLSSLNMDKTSLTITDDEFEKNVEAAVSAIAE
KHNAASPVEPQLSEKIPQSLLAQTQGEPSTRPDHDVNNGDLSTPRRSTSSDGDYSDGQAP
ITSLLQTIQRPLSTIGRMFSEDPTGSESGASAAARAPQPLDPNRLSPRPSGEEAREAGGR
PDPRNHPQLSVEEAAARQASAETAEAQRLHRAEHHNVVETLAGMFPDLDRDIISDVVVQK
QGRVGLAVDACLALST
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgaacaaggctcggggaagccatcttcggacgcacctgagaaggtccaagcc
ctcgacgacctcatcgacctcaccgacaagacagagccaacagcgtcagcatctgtagct
gccgacgccagcaaaccgagtagccccagcaaccacagcaaagatgccgaggccactgtc
tctcgcgcacatgttgtgacagaggcagacccagacggagaggcttctgcctccgcggac
cttatgaatgcttccgtggcaaccatcaagccgtcgaaacccctccccgccgacacctcg
acccagttcctcacgatcgagaccaaagcctacgttgatcctacgccacctaccccgaca
gcctcacgccctccttcaagaacaccgtccagtgtaggatcccgacaagatgcgtctccc
acgagatctgatgctgcctatgacgatcggaggtatacgagcgatgatgaccaggagaac
ggctcgcgctccgagattcagagcatcatggagcagttcaccggcgatggaggtggcccg
ggagctgaggaagtcatgagtccaagactcgagattacatcgcccattctcggcggcccg
attcaacatccaccaagaaagtcgagcctcgagcctctgtcaacctccttctcggcccag
tcgctggagaaggagaccttgggcgcagccataccttcgtcacccgtgagcacaagatcc
cggaccaggtcctcggtggatttcggtcctccagtgcccccgaaggacggccttcccggc
gccgaggacagccaaacttctctcgatactcccatgtcgccctcggccatgcaccggccc
ccaccacccgaacccgaaccagagccgaccctaccttttgactttcaccgtttcctcgag
cagctgcgcaacaagaaagccgaccctgtcgcgcgctatctcaaatcttttctatccgaa
ttcggcaagcggcagtggatggttcacgaacaagtcaagattatcggcgacttcctcgcc
ttcatagccaacaaaatggcgcagtgcgaggtctggcgcgatgtttcggacgccgagttt
gacaacgcgcgagagggcatggagaagcttgtcatgaataggctgtacacccagacgttc
tcgccggccatccccgcgccgcagcctattcctggggccaaacccaagaggagaggcggc
gagcggcccatgggaccggggcgtaagggccagcaccaagaggatgtcgagagggatgat
atcctgacacagaagatcaatatttacggttggattcgggaagcccatctcgatattcca
ccaacgagcgagagcgggaagcggttccttaagttagcacagcagggtctgctcaagcac
gcaaagtcagatggatcagcagactcgttcatgccattccttatatacgtagtgctccaa
tccaaccctgaacatcttgtgtcgaatgtgcagtacattcttcgattcaggaatcaggag
aaactgggtggcgaggccggatactacctgtcttctctgaacatggacaagaccagcctt
acgattaccgacgacgaattcgagaagaacgtcgaggccgccgtctcagccatcgcagag
aagcacaacgctgcatcgccggtggaaccacagctctctgagaaaatacctcaaagccta
ctggcccagacacaaggcgaaccctcgacccggcccgaccacgatgtcaacaacggagac
ttgtccacgcctcgccgctccacatcgtcagatggcgactactctgacggccaggccccc
atcacgagcctactccagacaatccagcggccgctcagtaccatcggacgcatgttctct
gaagatcccaccggatcggaatccggtgccagcgccgcggcgcgcgcgccgcagcctctt
gacccaaaccggttatcaccacggcccagtggcgaggaggcacgcgaggccggaggacgg
ccggacccacgcaaccacccgcagctgtcggtggaggaggcggcagcgaggcaagcgagc
gccgagacggccgaggcgcagaggttgcaccgggcggagcaccacaatgtcgttgagaca
cttgccggcatgtttccggacctcgacagggacattatctcggatgtcgtggtgcagaag
caggggagggtcggactagcggtggatgcctgccttgcattgtccacgtag
DBGET
integrated database retrieval system
