Verticillium alfalfae: VDBG_06371
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Entry
VDBG_06371 CDS
T02227
Name
(RefSeq) chromatin structure-remodeling complex protein RSC7
KO
K11761
chromatin structure-remodeling complex protein RSC7
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_06371
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_06371
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
VDBG_06371
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
VDBG_06371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRC_subunit
Motif
Other DBs
NCBI-GeneID:
9535521
NCBI-ProteinID:
XP_003003928
UniProt:
C9SN96
LinkDB
All DBs
AA seq
742 aa
AA seq
DB search
MGRRSGRAAARRASAALQSTPRAFEGIEDDEPMPDIPDEPASEPDEPPEPEAEDDDDDEQ
EKADDSNNDDADQEEAAGEPDAEDTEPSVKEPTPPPVATVRRKRLGRPPKNRPPDWDPMI
TVPASEADTPRRRGRGGWRGRGGRKPGPGQAPLKLRQAIDKEGTEVDIVNDECVLPEDPD
GETKVDKSGNLLGDREYRCRTFTVLGRGTRLYMLSTEPARCVGFRDSYLFFTKHLKLHKI
IVDDEEKRDMIDREIIPHSYKGRSIGIVTARSVFREFGARIVVGGRRVLDDYRVADAREE
EGVTDGDLADPNDMYNPAEPYNKNQYVAWHGASSVYHQNAPTAADPIVGKVEVKKRRVNV
NNTNWMLEHAREASTFNTSINAIRRYQNRGIYDVHTNMMQYPSIMQPTHTRIEQVAPEDE
PAPTSVFPRLPPAVARNAQVLDIYYESAPAGMAPSSSSKQRPAADFLAPFDGLSGVSDDI
KDLLPPACRAAFDRAAQREVDWAARWGNETDVCARGRAPLSIAPSSPSGRSLGETAPVSD
RMERQQDGMACLLDRVVRLLDRMAHLRGPECTPTRPNGTPARQNGIPARQDDTLPDARHA
CAAGDIDDALSRRTAQATLVASPCSPPRSTLVLDEAATTHRATGEGKWEFNRENMLGLWL
ALGVLINGCGKTGEIVASSPPTQVGTPKLCVQSHGGVCVGKIIVHFLLLYMTMGGSRKEG
GIRREIILVSSRASCFVMFAAE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaagatccggtcgcgccgccgctagacgcgcatcggctgcccttcagagtaca
ccacgcgcatttgagggcatcgaggatgatgaacccatgcctgatattcccgatgagcca
gcatccgaacccgatgagcctcccgaacccgaggccgaagacgacgacgacgatgagcag
gagaaggccgacgattcgaacaacgatgacgccgaccaggaggaagccgccggcgagcct
gacgccgaagacacagaaccctctgtcaaggaacccacaccgccgcccgtggccacagtc
cgccgcaagcgcctcggccgtcctccgaagaaccgtccgcccgactgggaccccatgatc
acggtgccagcctccgaggccgacacgccgcgccgtcgcggtcgtggcggctggcgcggg
cgcggcggtcgcaagcctggtcccggccaggcgccgctgaagctgcgccaggccatcgac
aaggagggcaccgaggtcgacattgtcaacgacgagtgcgtcctgcccgaggaccccgac
ggcgagacaaaggtcgacaagtcgggcaacctgctcggtgaccgcgagtaccgctgccgc
acctttaccgtcctcggacgcggcactcgcctctacatgctgtcgaccgagcccgcccgt
tgcgtcggcttccgcgactcgtacctcttcttcaccaagcacctcaagctgcacaagatc
atcgtcgacgacgaggagaagcgcgacatgattgatcgcgagatcatcccgcactcgtac
aagggccggtcgataggaatcgttactgcccgttccgtcttccgcgaatttggtgcgcgc
atcgtcgtcggtggccgccgcgtcctcgatgactaccgtgtcgccgacgcccgtgaggag
gagggcgtcaccgacggcgacctcgccgaccccaacgacatgtacaaccccgccgagccg
tacaacaagaaccagtacgtcgcctggcacggcgccagctctgtctaccaccaaaacgcc
cccacggcagccgaccccatcgtcggcaaggtcgaggtcaagaagcgccgcgtcaacgtc
aacaacaccaactggatgctcgagcacgcgcgcgaagccagcaccttcaacacatctatc
aacgccatccgccgctaccaaaatcgcggcatctacgacgtgcacacaaacatgatgcag
tacccctcgatcatgcagccgacgcacacgcgcatcgagcaggtggcccccgaagacgag
cccgcgccgacgtccgtcttcccacgcctgccacccgccgtcgctcgcaacgcccaggtc
ctcgacatctactacgagtcggcccccgccggcatggccccctcgtcctcgtccaagcag
cggcccgccgccgactttctcgccccctttgacggcctgtctggcgtctcggacgacatc
aaggacctgctgccgcccgcgtgccgcgccgcctttgaccgcgccgcccagcgcgaggtc
gattgggccgcacgctggggcaacgagacggatgtctgcgcgcgcgggcgagccccatta
tcgatcgcgccgtcgtccccttccggtaggtccctcggggagacggcgccagtttcggac
agaatggaacgccagcaagacggcatggcatgcctactagaccgagtggtacgcctacta
gacagaatggcacacctacggggacccgaatgcacgcccacgagaccaaatggcacgcct
gctagacagaacggcatacctgccagacaggatgatacactaccagacgcacggcacgca
tgcgccgcgggagacatcgacgacgcactgagtcggcgaacagcacaagcaacgctcgtg
gcgtcaccgtgtagcccgccgcgatcgacactcgtcttggatgaggcggcaactacacac
agagcaacgggggaggggaagtgggagtttaatcgggaaaacatgcttggactttggctg
gcgttgggggtgttgatcaacggatgtgggaaaacgggagagatcgtcgcgtcgtctccc
ccgactcaggtcggcaccccaaaactctgcgttcagtcgcatggtggtgtgtgtgtggga
aagatcattgtacactttcttcttctttacatgacgatgggggggtcgagaaaggagggc
ggaatacggagagaaatcattcttgtctcttctcgtgcctcgtgcttcgtcatgttcgcc
gcggagtga
DBGET
integrated database retrieval system
