Verticillium alfalfae: VDBG_06437
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Entry
VDBG_06437 CDS
T02227
Name
(RefSeq) endopolygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
val
Verticillium alfalfae
Pathway
val00040
Pentose and glucuronate interconversions
val01100
Metabolic pathways
Module
val_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
val00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VDBG_06437
Enzymes [BR:
val01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
VDBG_06437
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
DUF2111
Motif
Other DBs
NCBI-GeneID:
9536148
NCBI-ProteinID:
XP_003002875
UniProt:
C9SNG2
LinkDB
All DBs
AA seq
370 aa
AA seq
DB search
MLTNLILALGALASTAAANPLPAKFEVIESRATACTFTNTADLAKSKKTCDSITLNNIAV
PAGTTLDLSSLKSGAHVVFQGKTTFGYKEWEGPLIQISGEKITVEGASGHIIDADGARWW
DGQGGNGGKTKPKLLAVKGLNNSIVKGLNFKDQPVHGISVNTVNNLQLIDVTLDASAGDS
KGGHNTDGFDVGNAQNILISGAIVKNQDDCLAINSGTNITFTGGNCSGGHGLSIGSVGNR
SNNVVKTIRINNSKISNSDNGVRIKTISGATGSVSDVIYDTITLSNIAKNGIVIEQDYEN
GSPTGTPTAGVPITDLTINKVVGTVASKGTNVYILCAKGACSNWKWSGVNVTGGGKPKSC
QNVPSPAKCS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccaacctcatcctcgctctcggagctctggcttccaccgccgctgccaatcct
cttcccgccaagtttgaggtcattgagtcccgtgccaccgcttgcaccttcaccaacacc
gctgatcttgccaagagcaagaagacttgtgactcgattactctcaacaacattgctgtc
ccggctggcaccaccctcgacctttccagcctcaagagcggcgcccacgtcgtcttccag
ggcaagactaccttcggttacaaggagtgggaaggacctcttatccagatctctggcgag
aagatcaccgtcgagggcgcttccggccatatcattgacgccgatggcgcccgctggtgg
gatggccagggtggcaatggcggcaagaccaagcctaagctgcttgccgtcaagggcctt
aacaactcgattgtgaagggcctcaacttcaaggatcagcctgtgcatggaatcagtgtc
aacacggtgaacaacctccagctcattgacgtgaccctcgacgcctcggccggcgactct
aagggtggccacaacacggacggcttcgatgtcggtaacgcccagaacattctcatctcc
ggcgccattgtgaagaaccaagacgactgccttgctatcaactctggcaccaacatcaca
ttcactggaggcaactgcagcggcggccatggcctctctattggctctgttggaaaccgc
tctaacaatgtcgtcaagacgatccgcatcaacaacagcaagatttccaactctgacaac
ggtgtccgtatcaagaccatctccggtgccaccggttccgtctcggacgtcatctacgac
accatcaccctgtccaacattgccaagaacggcatcgtcatcgagcaggactacgagaat
ggctcccctaccggtacccctacggctggtgtccccatcaccgacctcaccatcaacaag
gtcgttggcaccgttgcctccaagggcactaacgtctacattctctgcgccaagggtgct
tgctccaactggaagtggagtggcgtcaacgttactggcggtggcaagcccaagagctgc
cagaacgtccccagccctgccaagtgctcttaa
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