Verticillium alfalfae: VDBG_06523
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Entry
VDBG_06523 CDS
T02227
Name
(RefSeq) leptomycin B resistance protein pmd1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
val
Verticillium alfalfae
Pathway
val02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
val00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VDBG_06523
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
val02000
]
VDBG_06523
04147 Exosome [BR:
val04147
]
VDBG_06523
04090 CD molecules [BR:
val04090
]
VDBG_06523
Enzymes [BR:
val01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
VDBG_06523
Transporters [BR:
val02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
VDBG_06523
Exosome [BR:
val04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VDBG_06523
CD molecules [BR:
val04090
]
Proteins
VDBG_06523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_29
AAA_21
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_25
RrnaAD
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
9537001
NCBI-ProteinID:
XP_003002961
UniProt:
C9SNP8
LinkDB
All DBs
AA seq
1002 aa
AA seq
DB search
MGAEPLNEKGATDGSDEALAAAAASKEPEPDVPEEEAPWAAYKRIFRYAGPVEYSLQAIA
IVAAIASGAGIALQNLIFGQFITVITDFTTGVNTPAQFMDDVSTLALYFVYLGIGRFLLA
YLYNSLLTYAAYRIIRNIRHEYLRAALSQEVAFYDFGTGGSIATQGTSNGRLINGGIAEK
LGLTFQGLSAFVTAFIIAFIVQWKLTLICLCIAPATIIVMGVIATIEAGHETKILEIYAQ
ANSFAEGVLSSARAVHAFEMRARLVHKFDEHLIEAHKVGSKISILFGIMFSAEYTIIYLG
FGLAFWQGTQMLSRGEISSSGEIFTVLLSVVIAAISLTTLAPYSIDFSRAASAAAKLFSL
MDRQSAIDPFDKSGEEPAETVGLVEIENVTFAYPTRPSTTVLDNFTLRVPAGKVTALVGQ
SGSGKSTIVGLLERWYNPKSGTIKLDGRPIETLNLNWLRKNVRLVQQEPVLFQGSVFDNI
KHGLIGTQWENAPVEEQRKLVQEAAKMAFAHDFVSELPNGYDTQIGQRGGLLSGGQKQRV
AIARSVVSQPKVLLLDEATSALDPHAESIVQQALDKASVGRTTIVIAHKLATIRKADNIV
VMTKGRIVEQGTHEALIANDDVYANLVKIQNLAVTDTDSTSDTEIDEANASKGEDLDVSK
SLTRYATSVQGRMEDQKERDNYDHHKQKGVFYVVIRLMRESPEVFWAYVFMILGCVGAAA
AFPGQAILLANVMEVFTLTGDAMRSRGSFYATMFIVLAAGVSSIEYWFMALGFWYGCRLL
SLGDISMYDFFVAFLGVFFSGQATAQLFQFSTSITKGINAANYIFWLRELQPTVQETPEN
HNNGPSAGGPIELDNVRFSYPLRPDAPVLKGVEMNSTMIAMLERFYDPTTGTLKIASSPL
PTLNPRLYRRLVALVQQEPTLFQGTIRENIALGLDDDPSDASSEKTAAAVPDSRIEAALR
AANAWTFVSSLPQGLATPAGANGTQLSGGQRQRIAIARALHS
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgaacccctgaacgaaaagggcgctaccgacggcagcgacgaggccctcgct
gctgccgccgccagtaaggagcctgagcctgatgttcctgaagaggaagctccttgggca
gcatacaaaagaatcttccgatatgctggtcctgtcgagtactccttgcaagccatcgcc
atcgttgctgcgattgcgtcaggcgctggcattgcgctccagaacctcattttcggccaa
ttcatcaccgtcatcaccgacttcactaccggtgtgaatacaccagcccaattcatggat
gatgtttctaccctggctctctactttgtatatctcggcatcggcagattccttctcgcc
tacctctacaactcccttctcacttacgccgcgtaccgcatcattcgcaatatccgtcac
gagtatctacgcgcagccctcagccaggaggtcgcattctatgactttggaacaggcggc
tccatcgcaacccaaggcacctccaacggccgcctcatcaacggcggtattgccgagaaa
cttggtcttactttccaagggctgtctgcattcgtcaccgcctttatcattgcattcatc
gtccagtggaagctcacgctcatctgcctctgcatcgcacccgccaccatcatcgtcatg
ggtgtcatcgctaccatcgaagccggtcacgagacgaagatcttggaaatctatgctcag
gccaattcattcgccgagggagtcctctctagtgcccgtgctgttcatgccttcgaaatg
cgtgccaggcttgtgcacaagttcgacgagcacctcatcgaagcgcacaaggtgggtagc
aagatatccatcctgttcggtatcatgttctctgccgagtataccatcatctacctgggc
tttggcttggctttctggcagggtactcagatgctctcgcgcggcgagatctcctcttca
ggcgaaatcttcactgtcttgctttcagtcgttatcgctgccatcagcttgacgacccta
gcaccgtactccattgactttagccgtgctgcatctgcagctgctaagcttttcagcctc
atggaccgccagtctgccatcgatccatttgacaagtctggcgaggagccagcggagact
gtcggcctcgtcgagattgagaatgtcaccttcgcctaccccacccggccgagcactaca
gttctcgacaacttcaccctacgtgttcctgctggcaaggtgactgcactcgtcggccag
tccggaagtggcaaaagtaccatagtcgggttgctcgaacggtggtacaaccccaaatcc
ggtacgatcaagcttgatggccgtccgatcgaaacgctgaacctcaactggctgcgcaag
aacgtccgcctcgtccagcaagagcccgttctgtttcaaggtagcgttttcgacaacatt
aaacacggcctcattgggacgcagtgggagaatgccccagtagaagagcagaggaaactg
gtgcaggaggcggccaagatggcgtttgcgcacgacttcgtctctgagctgccaaatggc
tacgatacgcaaatcggtcagcgtggcggtctactttctggtggacagaagcagcgcgtt
gctatcgcgcgcagtgtggtatcccagccgaaagtgctcctcctggacgaggctaccagc
gcacttgacccgcacgctgaaagcatcgttcaacaggccctcgataaggcttccgtcggc
cgtaccacgattgttattgctcacaagctggccaccatccgcaaggccgataacattgtc
gtcatgactaagggccgtatcgtggagcagggcacccacgaggcccttattgctaatgac
gatgtttacgccaaccttgtcaagatccagaacctcgccgtcacagacacagactcgacc
tcggacacggagattgacgaagccaacgcttccaagggcgaggacttggacgtctccaaa
tcactgactcgctacgcaacatcagtccaagggcgcatggaagatcagaaggaacgtgac
aactacgatcaccacaagcaaaagggcgtattctacgtcgtaattcgactcatgcgcgaa
tctccagaggttttctgggcgtacgtcttcatgattttgggctgcgtcggcgctgctgcc
gcatttccaggtcaggctatccttctggctaacgtcatggaagtcttcacattgaccggc
gatgccatgaggagtcgagggtctttctacgcaaccatgttcatcgtccttgccgctggg
gtgtcgtcgattgagtattggttcatggcgttgggtttctggtacggctgccgtctgctg
tccctcggcgacatcagcatgtatgactttttcgtcgccttcctgggtgtcttcttctcc
ggccaggccaccgcccagctgttccagttttcgacgagcatcaccaagggcatcaatgca
gccaactacattttctggctccgcgaattgcagcccacggtccaagaaacgcccgagaac
cacaacaacggtcccagcgctggcggtcctatcgagctcgacaacgttcgcttctcctat
cctcttcgtccggatgctcccgtgctcaaaggtgttgagatgaactccacaatgatcgcc
atgcttgaacgtttctacgatccgacgaccggcacgctcaagattgcttcctctccactg
cccactctgaacccaaggctctaccgtcgcctcgtcgcgcttgtacaacaagagccgacg
ctgttccaaggcacgatccgcgagaacattgccctcggcctggacgatgacccttccgat
gcctcgtcggagaagaccgcggccgcagttcctgactctcgaattgaggcagccctccgc
gcagccaacgcgtggacctttgtctcgtcgctgccacagggcctcgccactccagccggc
gccaacggcacgcagctgtcgggtggtcagaggcagcgcatcgccatcgcgcgggcgctt
cattcgtga
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