Verticillium alfalfae: VDBG_06778
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Entry
VDBG_06778 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K26244
transcriptional regulatory protein PHF12/RCO1
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_06778
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
VDBG_06778
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
PHDvar_NSD
PHD_2
PHD_NSD
PHD_4
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
9537342
NCBI-ProteinID:
XP_003003216
UniProt:
C9SPF3
LinkDB
All DBs
AA seq
1091 aa
AA seq
DB search
MPKWIPIAKKKEGQPVRRIILKKSTAHLQAAQATARASATAASSTPTPPATKTEFDRRSS
YSTVAEGVETTAVDSDGAGADAAASVVLGTKPESGSGSAPDSVTPASPSPQPLAQEASAP
AAAEKPMRRALPTNESDDEHDQKSTGTKTTTLRNPLSRRSLNRTVPARERIERVIEQAIH
EALDHCRYPTAWALRTLYDEKSSDAHFLTLVESIFSQTADSSVVDEFAKLIEAKKREGNK
ENRARDHFGPPSPNPNGMSGQKRKRAPYAKLITLDLTKARRPSSPEPTPAPAVPPPVVEA
PVPVPATPIVVTPSKRKHKSRKQHTASPFMAKPSTAGDGGALVTPSRRRARRDSAGSDSS
ALSELSGSPSLPSPTPAAIRDRNVEGAAAAPATSAKIIFNELRPSRQRNAKITKKMIIDA
PDPSALSSSGSPAPADPAMSDIPSSPQFADAVPARRPVGRPAKGSKTTRAAKANAKASTQ
GKSNNEVSAVDEANTARRRMARLQSNFADVDAPEESSIRGETQNSASASANATSAIDPPF
LGRSSKAPGGPPQSRVCPEPEEATIGGKEPPACLGTQAKGETTRLNKRGFEGVQAPFAKG
RSFPPRGASKWESFQKLARPSARGLSKSNAPGTGLRVKSSPKKKTIGTAAGVPRQSGEGH
PFSSSGAHFNSDDNDDYCSAGGGVGELIRCEHCSRSFHFECVDLLVDEPLPDEWFCQRCI
GTRFPTRSSDKRPGHFGALLAVLDKTNPGAFELPQHIQTYFENVRAGPQGDYEEENAVVP
KVPKKRGGYEEAPDFHKVRDADGSPVLCHNCQQATASDRSVIPCSICGLHWHLDCLDPPL
AIPPVLRTWVCPAHNDDLLAKLPGSLAPAHKYRKIRDATVITPLYSRGMKNNGFIEVIND
ESDNDSGWNDVTSFGRTYRLPEKGIILDFVSQKPVAPAAPDDEQLEAAPESRPMIGQVSI
TEHQAALNLAQLRESNSDGLSQLTTALLDNADPAVLSLIARGDATNLASGNLGQRDQQSL
QAMLAECKAMEARIHAALAGQSPTARDGDALSAKTESAEVDLPTPATTGPDHLESANGKS
DQGEAGIMDVD
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtggattcccatcgcgaagaagaaggaaggccagccggtgcgcaggatcatt
ctgaagaagagcacggcgcacctccaggcagcgcaggcgaccgcgcgagcctcggccaca
gctgcctcatccacgccgacgccgccggcgaccaagacggaattcgatcgaagatcttct
tacagcacggttgctgaaggggtggaaacgacggctgtcgacagcgacggcgctggtgct
gatgcggccgcgtcggtcgtgctgggaaccaagccagagtctggctctggctccgcacca
gacagtgtgacgcccgcctccccctctccgcaacctctcgcccaggaagcatcagcacct
gcagccgcggaaaagcccatgcggcgagcactgcctaccaacgagtcggacgacgagcac
gatcagaagagcaccggcaccaagacaacgacgctgcgcaatcccctgtcgaggcggagc
ctcaacagaaccgtgcctgccagggagcgcatcgaaagggtcattgagcaagcgattcac
gaggcactcgatcactgccgctatcccacggcatgggctctgcgtacgctttacgacgaa
aagtcctccgacgcgcattttctcactctggtcgagtccatcttttctcagactgccgac
tcgtcggtcgttgacgagtttgcgaagctcatcgaggcgaagaagagggaaggtaacaag
gaaaatcgagcccgcgatcactttggcccaccgtcgccaaatcccaacggcatgagcgga
caaaaaaggaagcgtgcaccgtacgccaaactcatcacgctcgatctcaccaaggcaaga
cgtccgagttcacctgaacccacacctgcgcctgcggtgccgcctccagtcgtcgaggcg
cccgtgcccgtgccagcaacgcccattgttgtgacgccgtcaaagaggaagcacaaatcg
cgaaagcagcacacagcatcgccgttcatggcgaaaccctcgaccgccggcgatggcggc
gccctcgtcacgccgtctcggaggcgtgctcgtcgggactccgcaggcagcgactcgtct
gctctgtcggagctttcgggctcgccttctctgccgtcgcctacgcctgcagctatccgt
gatcgcaacgtcgaaggggctgccgccgcccccgcgacgagcgccaagatcatcttcaac
gaactgcggcccagtcgacaacgcaacgcaaaaatcacaaagaagatgatcatcgacgca
cccgacccctcggccttgtcatcctcgggcagccctgcgcctgctgatcctgccatgtcg
gacattccctcgtcgccccaatttgctgacgcagttcccgctcgtaggccggtcggcagg
ccagctaagggctccaagacgacacgagcggcgaaggcaaatgccaaggcgtctacgcag
ggaaagagcaacaacgaggtcagcgctgtggatgaagccaacacggccaggcggaggatg
gcgcggcttcagagcaactttgccgacgtcgatgcccccgaggagagctcaatccgcggc
gagacgcagaacagcgccagcgccagcgcgaatgcgaccagcgccatcgatccgcccttc
ttgggacggagctccaaggcccccggtggccccccccaatcccgggtttgcccggaaccg
gaagaagcgacaatcggtgggaaggaacccccagcgtgccttggaacgcaggccaagggg
gaaaccacccggcttaacaagagggggtttgaaggggtccaagcccccttcgcgaaaggt
cgttcgttcccaccccgaggagcctcgaaatgggaatccttccagaagctggcacgcccg
tcagcacgcgggctgtcaaaaagcaacgcacctggcactgggctgcgtgtcaagtcatcg
cccaagaagaagaccatcggcactgcagcaggcgtacctcgccagagcggagagggacat
cctttctcatccagcggggctcacttcaattcggatgacaacgacgattattgctcggcg
ggcggcggggtaggtgaactcattcgctgtgagcactgctcccggtccttccatttcgag
tgcgtcgatctgctcgtcgacgagcctctccctgatgaatggttttgtcaacggtgcatc
ggaacgaggtttccgacccgatcatctgacaagaggccgggccatttcggtgccctcctg
gcggtgcttgacaagaccaatccaggggcgtttgagctgccgcagcacatccagacctac
tttgaaaatgtgcgagctggtcctcagggggactacgaggaagaaaacgccgtggtgccc
aaggtccccaagaaacgaggtggttacgaggaggcgccggacttccacaaagtccgcgat
gcagatgggtcgccagtcttgtgccacaactgccagcaagcgacggccagcgaccgttcc
gtcattccgtgcagcatttgtggtctgcactggcatctggactgtctcgacccgccgctc
gccatcccgccggttctgcgcacctgggtctgcccggctcacaatgatgacttgctggcg
aagcttcccggcagcctcgcccccgcccacaagtatcgcaagattcgcgatgccacggtt
atcaccccgctgtacagtcgtggcatgaagaacaatggcttcatcgaggtcatcaacgac
gagtctgacaatgacagcggatggaacgacgttacctcgtttggccgtacctaccgcttg
cccgagaagggcatcattttggattttgtctcacagaaacccgttgctccagcagccccc
gacgacgaacaactggaggctgcgccagagtcgcgacccatgatcggccaggtgtcgatc
acggaacaccaggcagcgctgaacctggctcagctgcgcgaatccaacagcgacggtctt
tctcagctcaccacagctcttctggataacgccgatcctgctgtcctgtcgctcatagcg
cgcggcgacgccactaacctcgccagcggcaacctgggccagcgagaccagcagagcctt
caggccatgctcgcggagtgcaaggccatggaagcacgcatccatgctgcgttggcgggc
cagagccctacggcccgcgacggcgatgctctatccgcaaagactgagtcggccgaggtt
gatcttcctacacctgccacgacaggcccagatcacctcgagtctgccaacggcaaatcc
gaccagggtgaggccggcattatggatgtcgattaa
DBGET
integrated database retrieval system
