Verticillium alfalfae: VDBG_06810
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Entry
VDBG_06810 CDS
T02227
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
val
Verticillium alfalfae
Pathway
val03013
Nucleocytoplasmic transport
val03015
mRNA surveillance pathway
val03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VDBG_06810
09122 Translation
03013 Nucleocytoplasmic transport
VDBG_06810
03015 mRNA surveillance pathway
VDBG_06810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_06810
03041 Spliceosome [BR:
val03041
]
VDBG_06810
Messenger RNA biogenesis [BR:
val03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
VDBG_06810
Spliceosome [BR:
val03041
]
Common components
Common spliceosomal components
Cap binding complex
VDBG_06810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
9537374
NCBI-ProteinID:
XP_003003248
UniProt:
C9SPI5
LinkDB
All DBs
AA seq
186 aa
AA seq
DB search
MTQHIRSTVERLDRPSAYYHNKNKRRRYNDREEEAEAPPAPQEDPLANSTTLYVGNLSFY
TTEEQVYELFAKCGEIKRLVMGLDRFNKTPCGFCFVEYFTHQDALDCMKYIGGTKLDERV
IRTDLDPGFEEGRQYGRGKSGGQVRDEYREDYDEGRGGHGRALEAERLQEVQNNNRGAEA
EYGRTR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacacattcgcagtaccgtcgagcgcctcgacaggccaagtgcctactatcac
aacaagaacaagcgcagaagatacaacgaccgcgaagaggaggctgaggcgcctcctgct
ccccaggaagaccctctcgccaattcaacgaccctctacgtcggcaacctgtcattctac
accaccgaggagcaggtgtacgagctgttcgccaagtgcggcgagatcaagcgcctcgtc
atgggtcttgaccgcttcaacaagacgccttgcgggttctgcttcgtcgaatacttcacc
caccaggacgcgctggactgcatgaagtacattggtggcaccaagctcgacgagcgcgtc
atccgcacggacctggaccctggtttcgaagagggccgccaatacggccgtggcaagagc
ggaggacaggtgcgcgatgagtatcgcgaagactacgacgagggacgcggtggtcatggc
agggcgctcgaggcggagcgtctccaggaagtgcagaataacaacaggggtgccgaggct
gagtatggacgcacaaggtga
DBGET
integrated database retrieval system
