Verticillium alfalfae: VDBG_06832
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Entry
VDBG_06832 CDS
T02227
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
val
Verticillium alfalfae
Pathway
val03420
Nucleotide excision repair
val04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
VDBG_06832
09124 Replication and repair
03420 Nucleotide excision repair
VDBG_06832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
val04121
]
VDBG_06832
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_06832
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
val04147
]
VDBG_06832
Ubiquitin system [BR:
val04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
VDBG_06832
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
VDBG_06832
TCR (transcription coupled repair) factors
Cul4-CSA complex
VDBG_06832
Exosome [BR:
val04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VDBG_06832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
9537396
NCBI-ProteinID:
XP_003003270
UniProt:
C9SPK7
LinkDB
All DBs
AA seq
777 aa
AA seq
DB search
MTTMSNKTKGKLPEVIDLTQQSAFRPYSGAKKIVIKNLRPPTQTDKTEQYYDRTRQQLKD
ALQCILRHQPLQLPMEKLYRGAEDICRHEQGQELYRMLQELCEAHLKQATLRSIIDRSPG
PSNIDMLRSVFLHWQDWNKAVIDIRSIFSYLDRTYLLRERTLGSINDLTITQFRKMLSSS
ASKDATNQTPFTRCLRGVCELIAYDRVNDDRFDARLLKESVRMFNVLNVYQKSFEPAFLH
DSVNFFHEFADERSTATLKEYILACEKLLKDEDYRCNAYNLDSTTKKQLLDAAHGIVVKD
YSAKLLDVESLSKLLADHEIESMRALYDLLRLSGIQAKLKDPWKTYIQEAGAAIVGNVER
GDDMVMRLLELRRALDLVVRDGFRGDEVFGYELRHAFGAFMNDRKTTSGWSTGTSKIGEM
IAKHIDMLLRGGLKALPKSLLSDNKDRAAAEKKRAIKFIEGKDAFEAFYKKDLPRRLLMG
RSASEDAERNMLRKLRDECGANFTRNLEQMFKDQELAKEEMQHYKQWSEGTNAEQQVDLQ
VMVISAASWPTYPDTKLNLPEGAAAEIERFERWYNHKHDGRKLSWPHSLANCTVKAIFPR
GTKELMVSAFQAVVLVLFNEVDLEGFLSFGQISTATGLAGPELQRTLQSLACGKVRVLSK
HPKGRDVSETDTFTINKAFTDPKLRIKINQIQLKETKEENKATHERIAEDRKFETQAAIV
RVMKARKTIGHSELVAEVINFTRKRGPVDAASIKKLIETLIDKDYMERDGNMYTYIS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgacgactatgtctaacaagacgaaggggaagctgcctgaagtgattgaccttacacag
cagagtgccttccggccatactcgggcgccaaaaagatcgtgatcaagaatctcaggcca
cccacgcagaccgacaagaccgagcagtattatgatcggacacggcagcagctcaaggat
gcccttcagtgcatacttcgccaccagcctctccaactgccaatggagaagctgtacagg
ggcgcggaggatatctgtaggcatgagcaggggcaggaactatatcggatgctacaagag
ctatgcgaagctcacttgaagcaagcaaccttgcgatccatcatcgacaggtcgccaggc
ccctcaaatattgacatgttgcggagcgtctttctccactggcaggattggaacaaggca
gttatagacattcggtctatattcagctacctcgacaggacgtatcttcttcgggagaga
acgctgggctcaatcaacgacttgacaatcacgcagttccggaagatgctctcgtcttcg
gccagcaaggacgctaccaaccagacaccttttactcgatgtctccgcggggtgtgcgag
ctgatcgcttacgatcgagtgaatgacgatcgattcgatgctcgattactgaaagaatca
gtccgtatgttcaacgtgcttaacgtctaccaaaagtcgtttgagccggcctttctccac
gactcagtcaacttcttccacgaatttgcagatgagaggagcacagcaactctgaaggag
tacatccttgcatgcgagaagcttttgaaggatgaggactaccgatgtaacgcgtacaac
cttgacagcacgaccaagaagcaacttctcgatgccgcccacggcatcgtggtgaaggat
tactcggctaagcttctggatgtcgaaagcttgtcgaagctgcttgctgatcacgaaatc
gagtcgatgcgagctctctacgacctcctgcggttgtcggggatccaggcgaagctgaag
gacccgtggaaaacctacatccaagaggctggagcagcgattgtgggcaacgtagagaga
ggagacgacatggtcatgaggttgcttgagctgaggcgagctctggatttggtcgtgcga
gatggcttcagaggtgatgaagtctttgggtacgagctgaggcatgccttcggcgctttc
atgaacgaccggaaaacgacttcggggtggagcacgggaacgtccaagattggagagatg
atcgcgaaacacatcgacatgctcttgcgaggcggtctcaaggctcttcccaagagtctg
ttgtctgacaacaaggatcgggctgctgctgaaaaaaagcgggcaatcaagttcattgaa
gggaaggacgcctttgaagctttttacaagaaagatctgcccaggcggctgctcatgggc
cgaagtgcgagcgaagatgccgagagaaatatgcttcgaaagctccgggatgagtgcggt
gccaactttacgcgtaatcttgagcagatgttcaaagatcaggagctcgccaaggaggag
atgcagcactacaagcaatggtcagaaggcacaaatgctgaacaacaagtcgatctgcaa
gttatggtcatctccgcagcgtcttggccgacatatcccgacacgaagctcaacctgcct
gaaggtgcagcggccgagatcgaacgattcgagcggtggtacaaccacaagcatgacggc
aggaaactctcgtggccccattcgctcgctaattgtacggtcaaggccatcttcccgaga
ggcacgaaagaactcatggtcagtgcgttccaggccgttgtgcttgtgctgttcaacgag
gtcgatcttgagggcttcctcagcttcggacagatcagcacagctacgggacttgcgggt
ccggaactccagcggacactacaatcgctcgcatgtggcaaggtccgagttttgagcaaa
caccccaagggaagggatgtcagcgagaccgatacttttaccatcaacaaagctttcact
gatcccaaacttcggatcaagatcaatcagattcagctcaaggagacgaaggaggagaat
aaagcgacacatgagcgcattgccgaggaccgtaaattcgagacgcaggcggccattgtg
cgggtgatgaaggcgcgcaagacgatcggacacagcgagctggtggctgaagtgatcaac
tttactcgcaagcgtggtcccgttgacgccgcctccatcaagaagctcatagagacgttg
attgacaaggactacatggagcgcgacggaaacatgtatacctacatctcatga
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integrated database retrieval system
