Verticillium alfalfae: VDBG_06972
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Entry
VDBG_06972 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K03255
protein TIF31
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
val03012
]
VDBG_06972
Translation factors [BR:
val03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
VDBG_06972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_10
TPR_12
CLU_N
TPR_NPHP3
TPR_8
GSKIP_dom
Hep_59
Motif
Other DBs
NCBI-GeneID:
9527395
NCBI-ProteinID:
XP_003002401
UniProt:
C9SR60
LinkDB
All DBs
AA seq
1208 aa
AA seq
DB search
MSSEKNEVPAGSIPAADEVAPQDDAGQDAAIAENHVDQEEHAAEALINLTIGLPQEPSSM
TILVSPQEQVHEVRQSIIDLPAAFRYTCFHLEHNGERVNDFIPMSEVPGIAENPNVTLVE
DPYTEKEARIHLVRIRELIGGAGDRADVVQGILPGLSLLDSIDVTAKHGSERNEDQPPAE
QPEPLAESTFSSAASISHLLPPPPDDAPKTIKTITLSSWNPPPCHLKQRGHLLYLIITTN
EGEQFQVTAHVGGFYVNKSSNSKFDPLPRPAPKGQSAHSLLSLLELISPSFESSFKALQE
FNNRKDPLATFQIANAIPAAPWIVPSTTSPHCTHLSDPTRSQETYLIAGVDNTDTLRDWN
EEFQSAKELPKETVQDRVFRERLLSKLFADYNDAATRGAVLVARGEIPPLNPTECKDAQI
FVYNNVFFSFGADGVGTFTSEGGDEAARVATGKDVAGVRLVNQLDVDGLFTTATVVVDYL
GKRIVGQSIVPGIFKPREPGENQIDYGAVEGKDIVAADDRFVSVFEKISRALRGKKHPVW
DKESKRIDFEASMKEWVDEQLAQRAQSKQDSTDDTTKQASTADSTGESTEAQAASEKEKD
RIDLSQFQFALNPDAFSGQLPQTPDEKAELKADEKDVRVACEYLTDRVIPDLVRELQDCD
ISFPMDGQALSRLLHKRGINVRYLGRIASLSTDPRLQCLRDIAIQDMVARSFKHVISSFL
RETPSPLASSCVAHLLNCLLGAELNPKPVADVDPTMKALYSDLDTSYELVTPQILRARIS
EETHRRYRFKLDGEWYKSIKPLQTLREISLKLGLQLQAKEYLFSKTDSTEAPTEAKPADA
TANGQLNGESKKKNKKKNRDASPAAVATTGAPCTFSADDVINIVPVVKHSCPRSALAEEA
LEAGRISIMQSQKKLGQELLLESLSLHEQIYGILHPEVARVYNTLSMLYYQLDEKEAAVE
LSRKAIVVSERTVGIDSAETLLNYLNLSLFLHQTGDSQGALSYAKHALQLWKIIYGPDHP
DSITTINNGAVMLQHLKAYHESRLWFEESLRVCEKVFGKSSINAATLLFQLAQALALDQD
SKGAVKRMRESYNIFLSELGADDKNTKEAESWLEQLTQNAVSIAKHAKDMQTRRLRTGIK
FSPRGAPFEADAPSAVASTSRQTQLDGSSQMDSRSIDELIKFIEGNDQQTNKSSKRPSRG
NPKRRGKA
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgagaaaaacgaggttcctgctgggtcgatccctgccgctgatgaagtcgca
cctcaagatgacgctgggcaggatgccgcgattgccgaaaaccatgttgatcaggaagag
cacgccgctgaggccctcatcaaccttacgattggcctaccgcaagagccctcctccatg
acgatcctggtctcaccccaggagcaagttcacgaagttcgtcagtccattatcgacttg
cctgcggccttccggtacacttgcttccacctcgagcacaatggcgagcgcgtcaatgac
ttcatccccatgtccgaagttcccggcattgccgaaaaccccaacgtgacgctggttgag
gatccctataccgaaaaggaggcccgcatacatcttgttaggattcgtgagctcatcggt
ggtgcgggcgaccgtgccgatgtagtccagggtatcctgcccggcctgtcgctccttgat
tctatcgatgttactgcgaagcatggctccgagcgaaacgaagatcagccgcctgctgag
cagcctgaaccactggcagagtccaccttcagctctgcagcttcgatttctcacctccta
ccgcccccacccgacgatgctcccaagaccatcaagaccatcacgctctcgtcctggaac
ccgcccccgtgccatttgaaacaaagggggcacctgctctacttgatcatcacgaccaac
gaaggtgaacagttccaggtcaccgcacacgttggcggcttttacgtcaacaagtcttcc
aacagcaagttcgatccgctaccgcggccggctcctaaaggacagtctgcccactcgctg
ctgagcctcctcgagctcatatctccgtcctttgagtcgagcttcaaggctctgcaggag
ttcaacaaccgcaaagaccctcttgccacgttccagattgccaacgctatccccgcagca
ccctggattgtaccatccaccacgtcgccccactgcacacacctctccgaccctactcgc
tcccaggagacgtacctgatcgcgggcgtggacaatactgacacgctgcgggactggaac
gaggagttccaatcggcgaaagaattgccgaaagagactgtccaagatcgagttttccgc
gaaagactcctttccaagctcttcgctgattacaacgacgctgccacccgcggtgcggtc
ctggtagctcgtggcgaaatcccacctcttaaccctacagaatgcaaggatgcccaaatt
tttgtttacaacaacgttttcttctccttcggagccgacggtgtgggcacgttcacttca
gagggcggagatgaagctgcacgggtcgccactggcaaggacgtcgcaggcgtaaggcta
gtgaaccagctggacgttgacggcctgttcactactgcaacagttgtcgtcgactacctc
ggaaagcgcatcgttggccagagtattgttcccggtattttcaaaccccgcgagcctggc
gagaatcaaatcgactacggcgctgtggaaggcaaggatattgtagctgcggatgatcgc
ttcgtctcggtctttgagaaaatatcccgtgcgttgaggggtaagaaacatccagtatgg
gacaaggagagcaaacgcattgacttcgaggcgagtatgaaggagtgggttgacgagcag
ctcgcgcagcgcgctcagtcgaagcaggattccacggacgacacgacaaagcaggcctcg
actgccgacagcacaggcgaatcgaccgaagctcaagcagcttccgagaaggagaaggac
cgcatcgatctctctcagttccaattcgctctcaaccccgacgccttcagcggccaattg
cctcaaacgcccgacgagaaagcggaactcaaggctgacgagaaagatgttcgtgtcgcc
tgcgagtatctgaccgatcgggtcattcctgacttggtgcgcgagcttcaggattgcgat
atcagtttccctatggatggccaagcactcagtcgtttgctgcacaagaggggtatcaac
gtgaggtacctgggtaggattgcctccctgagcacggacccgcgactccagtgcctaagg
gatatcgcgatccaggatatggtcgcccgttcgtttaagcacgtcatttcttccttcttg
cgggagacccccagcccgttggcctcgtcttgcgttgcccatcttctgaactgccttctc
ggcgcggagttgaatccgaagcctgttgccgacgtagatcccaccatgaaggcgctttac
tcggatctcgatacctcgtacgaattagtcactccgcagatcttaagggctcgtatctct
gaagaaacacatcgacgatacaggtttaagctggatggcgagtggtacaagagcattaag
cctcttcagaccctcagagaaatctctcttaagcttggtctccagttgcaagccaaggag
tacttgttctccaagacggacagtaccgaagctcctactgaagccaagcccgctgatgcg
acggccaatggtcagcttaatggcgagtcaaagaagaagaacaaaaagaagaaccgcgac
gcctcgcccgctgcagtcgctactactggagcaccgtgcacgtttagtgccgacgatgtc
atcaacattgtccctgtcgtcaagcactcctgccctcgtagcgctcttgccgaggaggcg
ctcgaggcaggccgcatctccatcatgcagtcgcagaagaagcttggccaagagcttctg
ctagagtctctctccctgcacgagcagatttatggcattcttcacccagaagttgctcgt
gtgtacaacacactgtccatgctttactaccagctggatgagaaggaggcagctgtagag
ctctcccgcaaggcgatcgttgtttctgagcggacggttggtatcgactcagccgagaca
ctactcaactaccttaacctcagcttattcctccaccagactggcgatagccaaggcgct
ttgtcgtatgcgaagcacgcccttcagctttggaagataatctatggccctgaccatcct
gactcgattacgaccatcaacaatggtgccgtcatgcttcagcacctgaaggcctaccat
gagtctagattatggtttgaggaatcgctacgagtctgcgagaaggtcttcggaaagtcg
tcgatcaacgctgcaacgctgctgttccagctggcgcaagcactggccctcgaccaagac
tccaagggcgcagtcaagcgcatgcgagaatcctacaacatcttcttgagcgagctaggc
gctgacgacaaaaacaccaaggaggcagagagctggctggagcaactaacccagaacgcc
gtctccatcgcaaagcacgccaaagatatgcagactcgccgcctgcgcacaggcatcaaa
ttttcacctcggggcgcccctttcgaagctgacgcaccctctgctgtcgcctcgacctct
cgccagactcagctcgatggctcctctcaaatggactcgcgtagcatcgatgagctcatc
aaattcattgagggcaacgaccagcaaaccaacaagtcttcgaagcggccaagcaggggt
aaccccaagaggcgaggcaaggcctga
DBGET
integrated database retrieval system