Verticillium alfalfae: VDBG_06994
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Entry
VDBG_06994 CDS
T02227
Name
(RefSeq) mRNA-decapping enzyme
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
val
Verticillium alfalfae
Pathway
val03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VDBG_06994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_06994
Enzymes [BR:
val01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
VDBG_06994
Messenger RNA biogenesis [BR:
val03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
VDBG_06994
mRNA degradation factors
5'-3' decay
Decapping complex
VDBG_06994
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
9527417
NCBI-ProteinID:
XP_003002423
UniProt:
C9SR82
LinkDB
All DBs
AA seq
169 aa
AA seq
DB search
MAAYKMQLEDWLDDLCVRFIINLPEEDLSSVARICFQIEEAQWFYEDFVRPLDPTLPSMT
LRNFSLRIFQHCPLLAPFSVENHTRAFEEFLQYKTRVPVRGAILLNEDMDSTVLVKGWKK
GANWSFPRGKINKDEDDWNAPSERSMKKRDTISMLPAWFLLIGMLSISR
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctacaagatgcagttagaagattggctggatgacctgtgcgtccgtttcatc
atcaacctccccgaggaggacctctcctccgtagcacggatatgctttcaaatcgaggaa
gctcaatggttttacgaggacttcgtccgtccgctcgacccaaccctaccttccatgacc
ctccgaaacttcagtctgagaatcttccaacactgccctctccttgcgccattctcggta
gagaaccacactcgcgcatttgaagagtttttacagtataaaacacgagtgcccgtacgc
ggagcaattcttctcaatgaggacatggactctactgttcttgtcaaaggttggaagaag
ggcgccaattggagtttcccacgtggcaagatcaataaggatgaggacgattggaatgcg
ccatccgagaggtctatgaagaaacgggatacgatctccatgctgccggcttggttcctc
ctaatcgggatgttaagcatatcgagataa
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