Verticillium alfalfae: VDBG_07004
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Entry
VDBG_07004 CDS
T02227
Name
(RefSeq) nucleolysin TIA-1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_07004
03041 Spliceosome [BR:
val03041
]
VDBG_07004
Messenger RNA biogenesis [BR:
val03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
VDBG_07004
Spliceosome [BR:
val03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
VDBG_07004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_7
Cas_Cas2CT1978
RRM_8
Motif
Other DBs
NCBI-GeneID:
9527427
NCBI-ProteinID:
XP_003002433
UniProt:
C9SR92
LinkDB
All DBs
AA seq
443 aa
AA seq
DB search
MARKPPPPLHIPQNNNPIPTAITSPLSGVDQALSPGSAGGFGRRAAPEPNKRALYIGGLD
QRVTEDVLRQIFETTGHVQNVKIIPDKNQKGYNYGFVEYDDPGAAARAMQTLNGRRVHEI
RVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRS
RGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTP
FGHHQFPAHGMASYEVILAQTPNWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD
RGFAFIKMESHEAAAMAICQMNGYNVNGRPLKCSWGKDKTPNAAGGFDPAQQGYSPQSAT
APGAYPGTPTAYFPQYGAQYSGQPGNYGGPTAQSPAGYGAQPMAYGGPQSAGGYGRGQQA
PSGQWQQGPQGQAFNNGYGGYQG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggccagaaagcctccccctcccctgcacatcccgcagaacaacaaccccattccgaca
gccatcacctcgcctctgtctggcgttgaccaggctctttcgccgggcagcgctggaggc
tttggccgccgtgctgctccggagcccaacaagcgtgccctctacatcgggggcctcgac
cagcgcgtaacggaagatgtcctgcggcagatattcgagacgactggccacgtccagaac
gtcaagatcatccccgacaagaaccaaaagggttacaactacggattcgttgagtacgac
gatcctggtgcggccgcccgcgctatgcaaaccttgaatggacgtcgtgttcacgaaatc
cgcgttaactgggcttaccagtccaacacaacgagcaaggaggacacctcgaaccacttc
cacatcttcgtgggcgacttgtcgaacgaggtcaacgacgagatcctttctcaagccttt
gctgccttcggatccgtctctgaggctcgtgtcatgtgggatatgaaaactggccgatcc
cggggttacggatttgtcgccttccgggaccgacctgatgcggagaaggctctgagctcc
atggatggcgaatggctgggttcccgcgctatccgctgcaactgggcgaaccagaagggc
cagccctcgattgcccagcagcaggccatgcaggccatgggcatgaccccgacgaccccc
ttcggtcaccaccagttccccgcgcatgggatggcctcctacgaggtcattctggctcag
accccgaactggcagacgaccgtctacgttggcaacctcactccttacactacccctaac
gacgttgtaccgctcttccaaaacttcggcttcgttgtcgagtctcgtttccaagcagac
cgtggatttgccttcatcaagatggagagccacgaggctgccgctatggccatttgccag
atgaacggctacaacgtcaatggccggcccctgaaatgcagctggggcaaggataagaca
cccaacgctgcgggtggcttcgaccctgctcagcagggctacagcccgcagagcgccact
gctcctggtgcctaccccggaacgcccactgcgtacttcccgcaatacggtgcgcaatac
agcggccagcctggtaactacggaggaccgactgctcagtcaccggccggctacggagct
caacccatggcatacggtggaccccagagtgcaggtggctacggccgtgggcagcaagcc
cccagcggccagtggcagcaaggacctcagggtcaggctttcaacaacggctacggcggt
taccaaggttaa
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