Verticillium alfalfae: VDBG_07053
Help
Entry
VDBG_07053 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
val03041
]
VDBG_07053
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_07053
Spliceosome [BR:
val03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
VDBG_07053
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
VDBG_07053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
HAT_Syf1_CNRKL1_N
RRM_Nup35
RRM_5
Nup35_RRM_2
HAT_PRP39_N
RRM_PARP14_3
Suf
HAT_PRP39_C
BRAP2
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
9527477
NCBI-ProteinID:
XP_003002482
UniProt:
C9SQ18
LinkDB
All DBs
AA seq
1025 aa
AA seq
DB search
MAPPLPVGEDRWVDYVAEHSRQANDLEKHVHVVELFKLAVDAEPSSLKIWRAYCDHFCLW
QQGYEAIQYRISDSHELWDRWISLERGLLDRTRTAEGVRRITHLYSDRLQIPHVTRDQTA
QDFSTFLSTYNKSAWEDTMQAVTAKSQEAKQLVEDREIFESKLRKAARDGADEEYKTLLK
EYLDWEISQSKRSSKTMETTGDLCRGLYSRALTGVFAFDEYVWMEYIRFLSTSGTFAQSP
YAMLDVIRRAVDHCPWSGALWSRYILSAEEARLPFHDIEQIKHKATSHPDLYKNGMTALL
DMYAGWCGFLKRTAMDLNASDEAVDIADMGLQAAIEFVDQAKNRYGDEYRGDPAFRLERI
YIQYLTEKKRSPDDARTHRHKLAEKSLYADSYDFWLNYYLWEMMVFASNGKDRSPTPSTA
AVGLRVPSVATAVLGRAFKRKTLDWSESYMDVYLQHCNDYKLPSTVRDATDSVTELRKET
ARRRELEAAQAAELYAAQLQQQQAAHAAEEADQQSPSGSQAEARRRAGRRGRASGDRENT
SVLVTNIPASVTQTKIRQYFKDYGHINSLQTVADKDGESQVVVIEFRSPEEAQSALLRDG
KYFGEAQIGVEPGTDLTVFVTNYPPTAGPDYLRNLFKDCGDIISVRMPSLKGNVRRRFSY
VTFRTREASTKATQKHGKLLDGEYKLTAMFSDPSRAKKRDGAVDEGRELHVTNLDTVVTE
DELKEVFSKIGPVQRVSIPRNKGGKGYGTAYIELASKEQANKAVAELNSTKFRTSIMTVA
LSTPVIYKRAAAVSGERNSASPVPSRDHGGDETMEDANGDSSKSQAREEVAARSIALLDI
PDTVNDARVKEIVGKIAGFTGLVLQPSHGGASVEFEDAASAGRAAMQLDGYLLDGRKLRT
GSVDELRHAKGEMRTDKIVYGGGGAKKDFAKASAGSRKPSFAPSTVRRPVLGKGGAKRGL
GFVASKGAAPIKANGAAVSAPPTEKGDAPPKPMKSNAEFKAMFLGGGSISSTTNGKEDED
AKKKE
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcccctccccgtcggcgaagaccgctgggtggactacgtcgccgagcatagc
cgccaggcgaatgaccttgaaaaacacgttcacgttgtcgagctctttaagctcgccgtc
gatgccgaacccagcagtctcaaaatctggcgcgcctattgcgatcacttttgcctctgg
caacaaggctatgaagctattcagtaccgcatcagcgacagccacgagctgtgggatcgc
tggatctctctcgagcgcggcctactcgaccgcacgaggacagctgagggtgttagacgt
atcacccacctctactccgaccgtctgcaaataccccacgtcacacgcgaccagactgcg
caggacttttccaccttcctctccacatataacaaatccgcctgggaggacacgatgcag
gctgtcacggccaagtctcaagaagccaagcaactcgtcgaagatcgcgaaatcttcgag
tccaagctacgcaaggccgcccgcgacggtgccgatgaggagtacaagaccctgttgaag
gagtatctagactgggagatttcgcagagcaagaggagcagcaagaccatggagacgacg
ggcgacctgtgtcgcggtctttactcacgcgctttgactggcgtctttgcgttcgatgaa
tacgtatggatggagtacattcggttcctctcaacctcggggacctttgcgcaatcccca
tacgccatgctagacgtcattcgccgcgctgtcgatcattgtccgtggtcgggggcgctg
tggtctcgttacatccttagcgccgaggaggccaggcttcctttccatgacattgaacag
atcaagcacaaggctacgagccaccccgacctctacaagaatgggatgaccgctctcctc
gacatgtacgctggctggtgtggcttcctgaagcgcactgccatggatctaaacgcttcc
gacgaggccgtcgacattgccgacatgggcctgcaggctgccatcgagtttgtcgaccaa
gccaagaatcgctacggagatgagtaccgcggcgatcccgccttccgcctcgaacgcatt
tacatccagtatctcacagaaaagaaacgttcgccagatgacgcgaggacgcatcggcac
aagcttgcggaaaagtcgctctacgcagatagctacgacttttggctcaactactatcta
tgggagatgatggtgttcgcctctaatggaaaggaccgcagcccaacgccttctaccgct
gccgtgggcctacgggtcccttctgtagccacagctgtactgggtcgcgcgttcaagcgt
aagacgctggactggtccgaaagctatatggatgtttacctccagcactgcaacgactat
aaacttcccagcaccgtgagagacgcgaccgacagcgtgactgagcttcgaaaagaaacc
gcccgacgtcgtgagctcgaggctgctcaggcggcagagctctatgccgcccagctccag
caacaacaggcagcgcatgcggcagaggaagcggatcagcagtcaccctcgggctcccaa
gcggaagcgcggagacgagcaggcagacgaggaagagcttctggggaccgcgaaaacaca
tctgtccttgtcaccaacatcccagccagcgtcacgcagaccaagatccggcaatacttc
aaagactacggacacatcaacagcttgcagactgtcgccgacaaggatggcgagtcacaa
gttgtcgtgattgaattcaggtcacccgaagaggctcagtcggcgctgctgcgcgatgga
aagtactttggcgaggctcagattggagtcgagcccggcaccgacctgaccgtctttgtc
accaattatcctccgacggcgggccccgattacctacgcaacctgtttaaagactgtggc
gacataatcagcgtccgcatgcccagcctgaagggcaatgtgcgtaggcgcttcagctat
gttaccttcaggacgcgggaggcctcgacaaaagccacgcagaaacacggcaagctcttg
gacggcgagtataaacttacagccatgttctctgatccgtctcgtgccaaaaagcgcgac
ggagcagtggacgagggtcgcgagcttcacgttaccaatctggatacagttgtcaccgaa
gacgaactcaaagaggtcttctccaagatcggccccgttcaacgggtgagcataccgcgc
aacaagggaggcaaaggttacggcactgcctatatcgagctcgcgtccaaggagcaggcc
aacaaggccgtcgcggaattaaacagcaccaagttccgcacttcgatcatgaccgtcgca
ctgtcaacacccgtcatttacaagcgcgccgccgccgtgtctggtgagcgcaactcggcc
tcaccggtgccgagtcgtgaccatgggggtgacgagacgatggaagacgcgaacggcgac
tcatcaaagtcgcaagcgcgggaggaagtcgccgcgcggagcattgccctgctcgacatc
cctgatacggtaaacgatgcacgcgtcaaggaaattgtcggcaagatcgccggcttcaca
ggtcttgttctgcagccgagccacggcggcgcgagtgttgagtttgaagacgcagcgagc
gcgggacgcgccgcgatgcagctagacggataccttctcgacggccgaaaactccggacc
ggctccgtcgacgagcttcggcacgccaagggcgagatgcggacggacaagattgtctac
ggtggcggcggcgccaaaaaggacttcgccaaggcgtccgcgggtagccgtaagccctcg
ttcgcgccatcgaccgtcagacggcccgtcctcggcaagggcggcgcaaagcgcggtctc
ggattcgtggcgagcaagggagccgcgccgattaaggcgaacggcgccgctgtgtctgca
ccgccgacggaaaaaggagacgcgccgccaaagccgatgaagagcaacgctgagtttaaa
gccatgttcctgggcggaggcagcatctcctcgacgaccaatggaaaggaagatgaggac
gccaagaagaaagagtga
DBGET
integrated database retrieval system
