Verticillium alfalfae: VDBG_07227
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Entry
VDBG_07227 CDS
T02227
Name
(RefSeq) DNA repair protein RAD50
Organism
val
Verticillium alfalfae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
AAA_29
AAA_13
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9527657
NCBI-ProteinID:
XP_003002656
UniProt:
C9SQJ2
LinkDB
All DBs
AA seq
1195 aa
AA seq
DB search
MSKIEKLSVQGIRSFGTGSGRETMQFFTPLTLIVGYNGSGKTTIIECLKYATTGEQPPNS
KGGAFVHDPKLVGEKEVLAQVKLAFTSTTGVKHVVTRSLQLTIKKTTRSLKTLEGSLATN
NNGERSVLSTRVAQMDEAVPALLGVSTAILDYVIFCHQDESLWPMSEPGALKKQFDQIFE
AMRYTKAIDNLKVLRKKQGEELARLKIHESQDKINKEKGDRAEKRSMELQAEIEGSREAC
NGMNDEMAELSAQIKQKRLEANKFLNIVNDLKYKKEQFKFRQSAISDLQTTLEELEEDDE
TLQTNLSQYEERMARFQTEERQNRSQYTQLQNDLGRSRNDLSARLSDKGKHESDKDKYER
QLASRVDLIHEAAELHGFRGFDGDLKDTQIKSFNDRIQKLLGDKKRDLERVQKENAQELT
SWNTGKKELIARKRKLETLTSTWKEKLDAQIGSEWQAETIEPQFQSVLKKQSQLVAQTRQ
KRDMAREKQQKIDFSLKSARDAQQKKSDEISRCHDKVLDVLKQIRDEATIDDYAEEVKLL
EEDVEAYSTDISLLEALSDYYKQCQETLTKKNKCKLCDRGFDDKQSVNKSRFSDKLIKYL
DPSKKEKASEDLDKSKATLDKLRQVRVHHETYERSLGELPGLKEACKTLEAELETHERQL
EEHDENVNAEEAKQADVETLNKTVMNISQTLKDMKDSEAQVERIMSQQSSGMATRTADEI
HELQATCKEQMRSTKARLTKITTDRQRMRDQLNSLELEKSELKNKLSRVQSQLERKKDFQ
NQIQTLKEDQANQRELIQKADQDLEVIEPSIAEARAVRDDTLQRGRAKEKAIVEERDLVA
NSVTELKMVESDIQDYMDRGGPSNLAANQRAIDGLEKTIAATEQEISDLTVRTNKLKQDI
DNGDRKKQNISNNLKFRQNKRQLDVLRAEIDDLQSCDADDDYDRLNDEAVQLENRHNMLV
AERGSLMGQMKTKDEELARLLGEWEMDYRDASKKYRESHIKVETTKAAIEDLGRYGAALD
KAIMQYHGLKMEEVNRIAGELWQSTYQGTDIDTILIRSDNEGATGRRSYNYRVCMVKQDT
EMDMRGRCSAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDKDNIKSLAESLHHII
KSRQAQSNFQLIVITHDEEFLRHMRCSEFCDSFFRVKRDDKQCSVISRESITRVL
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcgaaaagctgtccgtccagggcatccggtccttcgggaccggcagtggc
cgtgagaccatgcaattcttcacgcccctgaccctcattgtcggttacaacggttcggga
aagacgaccatcattgaatgcctcaaatacgccaccactggcgagcagccccccaacagc
aagggcggtgcattcgtccacgaccctaaactcgtcggcgagaaggaggtcctggcgcag
gtcaagctggcattcacctcgaccaccggcgttaagcatgtcgttacgcgaagtcttcaa
ttgacaatcaagaaaaccacccgctccctcaagaccctcgaggggtcgctagcgacgaac
aacaatggcgaacggtccgttctctcgacgcgagtggcgcagatggacgaggccgtcccc
gctctcctcggcgtttcgaccgccattctggactacgtcatattctgccatcaggacgaa
tctctatggcccatgagcgagcccggcgccttgaagaaacaatttgaccaaatctttgaa
gccatgcggtacacaaaagccattgacaacctcaaggtcctccggaagaagcaaggcgag
gagcttgcacgcctcaaaatacacgagagccaggacaagatcaacaaggagaaaggcgac
cgcgccgagaagagatccatggagcttcaagccgagattgagggatcaagggaagcatgc
aacggcatgaatgatgagatggccgagctctcagcgcagatcaagcagaagcggctcgag
gccaacaagttcttgaacattgttaatgacctcaaatacaaaaaggagcagttcaaattc
cgacagagcgccatctcggatcttcagactactctagaggagctcgaagaagacgatgag
actctgcaaaccaatttatcacagtatgaggagcgcatggcacgcttccaaactgaagag
cgccagaacagatcgcagtacacacaactccagaacgatctaggcagatcaaggaatgac
ttgtcggccagactttccgacaagggcaaacatgagtcggataaggacaagtacgaacgt
cagcttgcctcgcgtgtcgacctgattcacgaagctgcagagctgcacggctttcgaggt
tttgacggagatctgaaagacacgcagatcaagtcgttcaacgacaggattcaaaagctt
ctaggcgacaaaaaacgggatctcgagcgcgtccagaaggaaaacgctcaggagctgaca
agctggaataccggaaaaaaggagctgattgcccgcaagagaaagttggagactctcaca
agcacgtggaaggagaagcttgacgcacagatcggcagtgagtggcaggcggagacgatt
gaaccacagttccaatcagtgctcaaaaaacagtcgcagcttgttgcacagacgcggcaa
aaacgggacatggcacgcgagaagcaacaaaaaattgacttcagcctgaaatcagcgcgg
gacgcgcaacaaaagaagtcagacgagatttctcgctgtcatgacaaggtcctcgacgtc
ttaaaacagatcagggatgaggccaccatcgacgactatgctgaggaggtcaaacttctt
gaggaggatgtcgaggcctactcgacggacatcagccttctggaggcgttgtctgattac
tacaagcaatgccaggagacattgaccaagaagaacaagtgcaagctatgtgacagaggt
ttcgacgacaaacagagcgtcaacaagtcgcgtttctcggacaagcttatcaagtatctt
gacccttcgaagaaagagaaggccagtgaggatctcgacaagtccaaggcgacgctcgat
aagttgcggcaagtcagagttcatcacgaaacgtacgagcggtcactaggcgagctacca
ggtctgaaagaagcgtgcaaaactcttgaggccgagcttgagacccacgagaggcagctt
gaagagcatgatgagaatgtcaatgccgaagaggcgaaacaggccgacgttgagaccttg
aataagacagtcatgaacatctcgcagactctcaaagacatgaaggattccgaggcccag
gttgagcggatcatgtcgcaacagtcatctggcatggctacgcgaactgcagatgaaata
catgagctgcaggcaacctgcaaagagcagatgcgttcgacgaaagctcgactcaccaag
atcacaactgaccggcagaggatgcgagaccagctcaacagcctagaactagaaaaaagc
gagttgaaaaacaagctcagcagggtgcagagtcaattggagcgcaagaaggacttccag
aaccagatccaaactttgaaagaggaccaggccaatcaacgggagctcattcagaaggct
gaccaagatctggaggtcattgagccttcaatcgcagaggctcgcgcagtgcgggatgat
acgctccagcgcggccgcgcgaaagaaaaggccatcgtagaggagcgcgatttggttgcc
aactcggttactgaactcaagatggtcgaaagcgacattcaggactacatggaccgtggg
gggccttcgaatctcgccgcgaaccagcgcgccattgatggccttgaaaagacgattgcg
gccacggaacaggaaatatccgatctcacggtccggacgaataagttgaagcaagacatc
gataatggcgaccggaaaaagcaaaacatcagcaacaacctgaagttccgccagaacaag
cgtcaactcgacgtgcttcgcgctgagattgacgatctccaatcctgcgacgccgatgac
gactacgaccggctcaatgacgaggcggtccaactagagaaccgtcacaacatgctagta
gccgaacgcggctctctcatgggccagatgaagaccaaggacgaggagcttgcgcgactt
cttggcgagtgggaaatggactaccgggacgcttccaagaagtatcgagagtcccacatc
aaggtcgagacgaccaaggcggcgatcgaggatcttggtcgctacggcgccgcactcgac
aaggccatcatgcagtaccacggcctgaagatggaagaagtcaaccgcatcgctggcgag
ctgtggcagagcacataccaaggtaccgacattgatacgattctcattcggtccgacaac
gaaggtgccacaggccggcgctcgtacaactaccgcgtgtgcatggtcaagcaggacacc
gagatggacatgcgcgggcgctgctcagctggccagaaggtgctcgccagtatcatcatc
cgcctcgcgctggcggagtctttcggcgtcaactgcggcctcatcgcactagacgagccg
accaccaacctcgacaaggacaacatcaagtctctcgccgagagcttgcatcacatcatc
aagtcacgccaggcgcagagcaacttccagctcatcgtcatcacccacgacgaggagttt
ctccgacacatgcggtgcagcgagttctgcgacagcttcttccgcgtgaagcgtgacgac
aagcaatgcagcgttatttcgcgagagagcattacgagggtgctgtaa
DBGET
integrated database retrieval system
