KEGG   Verticillium alfalfae: VDBG_07243
Entry
VDBG_07243        CDS       T02227                                 
Name
(RefSeq) GTP-binding protein ypt5
  KO
K07888  Ras-related protein Rab-5B
Organism
val  Verticillium alfalfae
Pathway
val04144  Endocytosis
val04145  Phagosome
val04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:val00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    VDBG_07243
   04145 Phagosome
    VDBG_07243
   04148 Efferocytosis
    VDBG_07243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:val04131]
    VDBG_07243
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:val04147]
    VDBG_07243
   04031 GTP-binding proteins [BR:val04031]
    VDBG_07243
Membrane trafficking [BR:val04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    VDBG_07243
 Endosome - Lysosome transport
    VDBG_07243
Exosome [BR:val04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   VDBG_07243
  Exosomal proteins of other body fluids (saliva and urine)
   VDBG_07243
  Exosomal proteins of colorectal cancer cells
   VDBG_07243
  Exosomal proteins of melanoma cells
   VDBG_07243
GTP-binding proteins [BR:val04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    VDBG_07243
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase
Other DBs
NCBI-GeneID: 9527673
NCBI-ProteinID: XP_003002672
UniProt: C9SQK8
LinkDB
AA seq 241 aa
MASRAVQALPPPRGLQHSLCAVQACSSGRIRRWKGSPPQPRRRCIVHVADLPQSSIVLRF
VKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQERYKSLAPMYYRNANCAVVV
YDITQSSSLDKAKAWVKELQRQANENIIIALAGNKLDLVTEQPDKRAVSTADAEAYAKEA
GLLFFETSAKTAENVRELFTAIAKKLPLDQVGPRHARPGQRQGVSLTPENANNTMGGGCS
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcttcccgtgcggtccaggcgctcccgccgccgcgggggctccaacactcgctttgc
gcagttcaagcttgttcttctgggagaatccgccgttggaaaggtagcccgccccagcct
cggcggagatgcattgtacatgtcgctgacctgccacagagctccatcgtcttgcgattc
gtcaaggaccaattcgactcgtatcgggaatcgaccatcggcgctgctttcctgacgcaa
accatttcgctcgacgagaacacaacagtcaagtttgagatctgggataccgccggccag
gaacgctacaagtcgctcgcccccatgtactaccgcaacgccaactgtgccgtcgtcgtc
tacgacattacccaatcctcgtccctcgacaaggccaaggcctgggtcaaggagctgcag
cgtcaagcgaacgagaacatcatcatcgcgctggccggcaacaagctggatttggtcacc
gagcagcccgacaagcgcgccgtctccacggctgatgccgaggcctacgccaaggaggcc
ggtctgctcttctttgagacatcggcaaagacggccgagaatgtccgcgagctcttcacg
gccatcgcgaagaagctgcccctggatcaggtcggccctaggcacgcgcggccaggccag
cgacagggcgtcagcctgacccccgaaaacgcgaacaacaccatgggcggaggctgcagc
tgctaa

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