Verticillium alfalfae: VDBG_07265
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Entry
VDBG_07265 CDS
T02227
Name
(RefSeq) exo-rhamnogalacturonase B
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
val
Verticillium alfalfae
Pathway
val00040
Pentose and glucuronate interconversions
val01100
Metabolic pathways
Module
val_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
val00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VDBG_07265
Enzymes [BR:
val01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
VDBG_07265
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9527698
NCBI-ProteinID:
XP_003002694
UniProt:
C9SQN0
LinkDB
All DBs
AA seq
457 aa
AA seq
DB search
MAASAAASVLRFSPSILPSLPHDPLPAVRVPTKAYWVEKAALEGRQVCHIKPDPHGGDDA
PAILEAFNHKCRYKSIIILPGPLYHINTPMNTTSLEDVFIEQYGRLLWSNDVDYWLSASM
PINFQNQSTVWNFGGDRVVWQGHGSGTMDGNGQVWYDWARGRGNLAHRPMNINIKGLRDS
VLKGLRFVQSQMWTMTIQHSSHVLLEDIYVNSTSRSEYNTLNTDGADTMYSDHITFRRWR
VANGDDAIALKANSTNISVYDSEFWHSTGIAVGSVGQFVGQHEHIENFHVRNVTMHNVSR
ACHFKTWTGRQLGYPPNGGGGGTGHARNIVFEDITLDGTRATPLHIWQCESYNGHAGQEC
DTSRFKISDVLWRRFKGTTGAGVDRAGWFRCSAGAGGCSNVTIEDWDVRTAGRNSLLNKW
YCENVSDNVGFRCEGGGEKGPSARVPFEDKEWTQAEL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcggccgccgcttcagtcctccgattctctccttccatccttcccagtctt
ccccatgaccctctaccagcggttcgcgtgccaacaaaggcctactgggtggaaaaggcg
gccctcgaaggccgccaagtctgtcatatcaagccagatcctcatggcggtgacgacgcc
cctgccattctcgaggcgttcaaccacaaatgccgatacaagagcatcattatcctgcca
ggtcctctgtatcacatcaacacgccgatgaacactaccagcctggaggacgtttttatc
gagcagtatggacgtctcctatggtccaacgacgtcgactactggctctccgcatcgatg
cccatcaactttcagaatcagagcacagtctggaatttcggtggtgaccgtgttgtctgg
cagggtcatggctccggcaccatggacggcaacggccaggtctggtatgactgggcgcga
ggccgcggcaacctcgcgcaccgtccgatgaacatcaacatcaagggacttcgcgactcg
gtgctcaagggcctgcgcttcgtgcagtcccagatgtggacaatgacaatccagcactcc
tcgcacgtgctgctcgaagatatctatgtcaacagcacgtcgcgttctgagtacaacaca
ctcaacacagacggcgctgacacgatgtactcggatcacatcacgtttcggcgttggcgt
gttgccaatggcgatgacgccattgccctcaaggccaactcgaccaatatctctgtgtac
gactccgagttctggcacagcacgggcatcgccgtgggctccgtgggccagttcgtcggt
cagcacgagcacattgagaactttcatgtccgcaacgtcaccatgcacaacgtcagccgg
gcgtgtcactttaagacgtggacagggcggcagctcgggtacccgcccaacggcggcgga
ggcgggacgggccacgcgcgaaacatcgtgttcgaggacatcacgctcgacgggacgcgt
gcgacaccgctgcacatatggcagtgcgagtcgtacaacggacacgccggccaggagtgc
gacacttcccggttcaagatctcagatgtcctctggcggcggttcaagggaacgacaggc
gcgggagttgatagagcagggtggttcaggtgcagcgccggagcgggcggctgtagcaac
gtgacgattgaagattgggatgttcggactgcgggcagaaacagccttctgaacaagtgg
tactgcgagaacgtcagcgacaatgttgggtttcgttgcgagggtgggggagagaaaggt
cccagtgcgagggtgccttttgaagacaaggaatggacccaggcggaactttag
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