Verticillium alfalfae: VDBG_07408
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Entry
VDBG_07408 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K27411
phagosome assembly factor 1
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_07408
Membrane trafficking [BR:
val04131
]
Autophagy
Other autophagy associated proteins
Others
VDBG_07408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHAF1
2EXR
DUF5956
Motif
Other DBs
NCBI-GeneID:
9527846
NCBI-ProteinID:
XP_003002837
UniProt:
C9SR23
LinkDB
All DBs
AA seq
623 aa
AA seq
DB search
MAVFAGDSWSQARENIWSEILPSIKTVPVLPRGKDVIPDEISLVKIHGAGKIQLFRKWTG
ASFWVRLGETTPQELVAELGPPNATYRKNDQRMTIHKIRTASHSRTRANGTDTTRPDELT
DTDQSSAHTGSDDSNDEVIEDDAVGRVGGECFYNYFYLGFDVLVSTPSPPSQPPPTTDTT
TLPPSSTAITESPDRLVATKLVLHGNVPGSYEFNRHRRCRWEISYLEDDAAGTITANSEA
RFTDIEERLHEAWKGLLPSGDGTQRQRGMVLNRGWGDSPGSSVEFLGGWEDSGGHGGVQK
LDGGDDSTTTLYGFPGLVFEVLKNGRMHCVRAVQVFSHTVSWSIASGHVQRASSPSSLPT
VLNHAPHGARHAACRYLAMGTPEFDRFFDLPPEIREEIISYLTAAPDLIPLNPLTPFTPF
PHDLFLSHPLLHATASLLYYTSNTFILDLTAHARAATERALADPYHNILLTPSARRRIRH
LTFRPARLGTAFTALVLPALIDMILAGSLRHLTVLMPVRRHRGPVAPNRPAPPPTQTERA
EDAAFASSPAFRALLRLLADPDLETARLTVLAAHRPLWCAYHDEGAACCYAGRGRGVADV
DWRALAAECAGEDPELHIARVGR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcttcgccggtgactcgtggtcacaggcgcgagagaacatctggagcgagatc
ctccccagcatcaaaacagtacctgttcttccaagggggaaggacgtgatacccgatgag
atatcactcgtcaagatacacggggctggaaagattcaactgttccggaagtggacgggt
gcatccttctgggtcaggctcggcgagacgacgcctcaggagctcgtggccgagctggga
cccccgaatgcgacataccgcaaaaacgaccagagaatgaccattcacaagatccgcacc
gcaagtcacagccgcacgcgcgccaacgggacggatactacgcgccctgacgagctgact
gacacagatcagtcgtcggcgcacacgggctccgatgactccaacgacgaagttattgaa
gacgatgccgtgggccgcgtaggtggcgagtgtttttacaactatttctacctcgggttc
gatgtcctcgtttcgacacctagtccgccatcacagcctcccccaaccactgacacgacg
acactgccaccgagcagcacggcaatcaccgagtccccagaccggctcgtagcgacaaag
ttggtgcttcacggaaacgtgccgggttcctacgagttcaaccgtcatcggaggtgtcgg
tgggagattagctatcttgaggatgacgctgctggtacaataacagccaactcagaggcc
aggttcacggacatcgaagagagactgcacgaagcgtggaagggcctactaccaagcgga
gatgggacgcagaggcaacggggcatggtattgaaccgtggatggggcgatagccccgga
agcagcgtcgagtttctcggtggctgggaagacagcggcggccatggtggcgtgcagaag
ctggacggcggtgatgattcgaccacgacgctttatggtttcccagggctcgtgtttgaa
gttctcaagaacggccgcatgcactgtgtacgggctgttcaggtatttagccacactgta
tcatggtccatcgctagtgggcatgttcaacgagcatcatcaccatcttcgctacctacc
gtactcaaccatgcgccccacggcgcccgtcacgctgcctgccgatacctcgccatgggc
actcccgaattcgatcggttctttgaccttccccctgagattcgcgaggagatcatttcc
tacctcaccgccgccccagatctcatacccctcaaccctctgacgcctttcacccccttc
cctcacgatctcttcctctctcaccccctcctccatgcgacggcctcgttgctctactac
acctccaacacgttcatcctggacctgacagcccacgcccgcgccgccaccgaacgcgcc
ctcgccgacccctaccacaacatcctcctgaccccctccgcccgccgccgcatccgccac
ctcacattccgccccgcccgcctcggcacagccttcacggccctcgtgctgccggccctg
atagacatgatcctcgccggcagcctccgccacctgacggtcctgatgcccgtccgccgg
caccgcggccccgtagccccgaaccgtcccgccccgccaccgacgcagaccgagcgcgcc
gaggatgccgcctttgcgtcgtcgcctgccttccgcgccctgctgcgcctgctcgccgac
ccggacctcgagacggcgcggctaacggtcctggccgcgcacaggccgctatggtgcgcg
taccatgacgagggggccgcgtgctgctacgccgggcgcggccgcggcgtggctgacgtg
gactggcgggctctggcggccgagtgcgcgggcgaggacccggagctgcacattgcacgg
gttgggagatga
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