Verticillium alfalfae: VDBG_07458
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Entry
VDBG_07458 CDS
T02227
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_07458
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
val04147
]
VDBG_07458
Membrane trafficking [BR:
val04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
VDBG_07458
Exosome [BR:
val04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VDBG_07458
Exosomal proteins of bladder cancer cells
VDBG_07458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40_Prp19
WD40
TPR_COPA_B
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EIPR1
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_DCAF4
TPR_IFT80_172
Motif
Other DBs
NCBI-GeneID:
9537225
NCBI-ProteinID:
XP_003001999
UniProt:
C9SRD3
LinkDB
All DBs
AA seq
1052 aa
AA seq
DB search
MSASGNNMLTKFESKSSRAKGIAFHPKRPWILVALHSSTIQLWDYRMGTLIDRFEEHDGP
VRGIDFHKTQPLFVSGGDDYKIKHSAPTSMTIEEQIARANQNQADMFGNTDAVVKFVLEG
HDRGVNWVAFHPTMPLIVSAGDDRLVKLWRMSETKAWEVDTCRGHFQNASGCLFHPHQDL
ILSVGEDKTVRVWDLNKRTAVQTFKRENDRFWVIAAHPEINLFAAGHDNGVMVFKLERER
PASAVYQNNLFYINKEKHVKSFDFQKSIESPTLLSLKKLGSPWSPPRTISYNPAERSVLV
TSTTDSGSYELISLPKDSSGAIEPTESKRGSGNSAIFVARNRFAVLSVASQTIDIKDLAN
NVTRSFKPPVGTTDIYFGGTGNLLIINPTHVHLYDIQQKKSVAELAVTGVKYVVWSNDGL
YAALLSKHNVTIVTKSLEQTVYLVRVKGRNVYCLDRAAKPKVLQIDPTEYRFKLALVKRN
YEEMLHIIKNSSLVGQSIISYLQKKGYPDIALQFVEDPATRFELAIECGNLDVAVEVAKE
LDRPKLWTRLSTEALSHGNHQIVEMCYQKLKQFDKLSFLYLSTGDHSKLARMAKIAEHRG
DFTSRFQNALYLGEVEDRIQMFKEIDLYQLTMPSIGEPLSPPKPVVPTYKANWPTKPTSQ
SIFETALNDPAGGALEEATAGVDEFGLDEAGDSTAKRNGNLIDVDDDEDAAGWDMGDDVV
PEVEGDFVNVESADAGGAASSEADLWARNSPLAVDHVAGGSYETAMQLLNRQVGAVNFAP
LKPRFLEVYQASKTYLPASAGLPPLVNYVRRTVEETDPRKVLPIVPRDLEFLATNDLQKG
YDSMKTNKLEQGLKIFKGILHTILVNAVSSESEVAEAKKLITSASEYAVAMAVELGRREL
GAPDVVSQKPELLKRSLELSAYFTIPKIEVPHRQLALLSAMQLAVKNKNYSSALSFANRI
IANGGATKIIENAKRIKAQCERNPHDSIELEFDQFAEFEVCAASHTPIYSGTAYEECAFD
GSKYHSKYKGSVCRVCEVCEIGKHGSGLKLFA
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctcgggcaataacatgttgaccaagttcgagtcaaagtcttcgcgcgcaaag
ggcattgccttccaccccaagaggccatggattctcgtcgccctccactcgtctacaatc
cagctctgggactaccgcatgggaactctcatcgaccgatttgaggaacacgatggcccc
gttcgcggaattgacttccacaagacccagcccctcttcgtctcgggcggtgacgactac
aagatcaagcactccgccccgacctccatgacaatcgaagaacaaatcgcccgagcgaat
cagaaccaggccgacatgtttggcaacaccgatgctgttgtcaagtttgtactcgagggt
cacgaccgtggtgtcaactgggtcgccttccaccctacaatgcccctcattgtgtccgcg
ggcgacgatcgtcttgtcaagctctggcgcatgagcgaaacgaaagcctgggaagtcgat
acttgccgtggccatttccagaacgcctcgggttgtcttttccaccctcaccaggatctg
attctctccgtgggagaggataagaccgttcgggtatgggacctcaacaagaggacagca
gtgcagaccttcaagcgcgagaacgacagattctgggttattgctgcccatcccgagatc
aacctctttgcggcgggtcacgataacggcgtgatggtcttcaagctcgaacgagagcgc
ccggcctcagcggtgtaccagaacaacctcttctacatcaacaaggagaagcatgtcaag
tctttcgatttccagaagagcatcgaaagcccgactctgttgtctctcaaaaagctgggc
agcccttggtcgcctccacgaacgatctcatataaccctgccgagcggtctgtactagtt
acgtcaacaaccgacagcggctcctacgagcttatcagcctccctaaggatagctctggt
gctattgaaccgaccgagtctaagcgcggctctggaaactctgccatttttgtcgcgaga
aaccgctttgcggttctaagtgtggcctcccagaccatcgacatcaaggaccttgcgaac
aatgtcacccggtctttcaagccccctgttggtacgactgacatttactttggcggcacc
ggcaacctcctgatcatcaaccccacacacgttcacctttatgacattcaacagaaaaag
agtgttgccgagctcgccgtcaccggtgtcaagtacgttgtgtggtctaatgacggcctc
tatgctgcgcttctcagcaaacacaacgtgaccattgtcaccaagtcgctcgagcagact
gtctacctcgtccgcgtcaagggtcgcaacgtgtactgcttggatcgtgctgccaaacct
aaggttctgcaaatcgaccctactgagtaccgcttcaagcttgctcttgtgaagaggaac
tacgaggagatgcttcacattatcaagaactccagtcttgtgggacagtctatcatctcg
tacctgcaaaagaaggggtatccagatattgccctgcagtttgtcgaggaccctgccacc
cgattcgaactcgcgatcgagtgtggtaaccttgatgttgctgtcgaggtagccaaggaa
ctggatcgacccaagctctggacacgtttgagcaccgaggctctttcccatggaaaccac
cagattgtcgagatgtgctaccagaagctcaagcagttcgacaagctgtccttcttgtat
ctttccaccggcgaccactccaagttggctcgtatggccaagattgcagagcaccgtggc
gacttcacttcccgtttccagaacgccctatacctcggcgaggttgaggacagaattcag
atgttcaaggaaattgatctctaccagctcaccatgccttcaatcggagagcctttgtcg
cccccaaagccggtcgtgccaacctacaaggccaactggcccaccaagccaacctcacag
tcgatcttcgaaactgcgctcaacgacccggctggcggtgctctggaggaggccacagcc
ggagttgacgaatttggtcttgatgaagctggtgacagcactgccaaacgcaacggcaac
ctaattgatgtcgatgacgatgaggacgctgccggctgggacatgggcgacgatgtcgtt
cccgaagtcgagggcgactttgtcaacgttgaaagcgctgacgccggcggtgctgccagc
agcgaggccgacctctgggctcgcaactcgccattagctgtggaccacgtcgccggtggt
tcttacgagactgcgatgcaactactgaaccgacaggtcggtgccgtcaactttgcgccc
ttgaagcctcggttcctcgaagtataccaggcctccaaaacatacctgcccgcgtcggca
ggtttgcctcctctcgtcaactatgtgcgtcgcaccgtcgaggagacggacccaaggaag
gttcttcccattgtgccacgcgatctagaattccttgccacaaacgatttgcaaaagggc
tatgattcgatgaaaacgaacaagctggagcagggcctcaagattttcaagggtatcctg
cacaccatcctcgtcaacgctgtctcgagtgaaagcgaggtggctgaggctaagaagctc
attacctcggccagcgagtacgccgtcgctatggcggtcgagctcgggcgccgagagctc
ggggctcccgatgtcgtgtcgcaaaaacccgagcttctcaagcgcagccttgagctttcg
gcgtacttcactatccccaagattgaggtccctcacaggcaactcgcactgctgagtgcc
atgcagctggcggttaagaacaagaactacagttctgcacttagcttcgcgaacaggatc
atcgccaacggtggcgccaccaagatcattgaaaacgccaagaggatcaaggctcagtgc
gagcgtaacccccacgactcgatcgaacttgagtttgaccagttcgccgagttcgaggtg
tgcgctgccagccacacgccaatctacagcggcacggcgtacgaggagtgtgcgtttgac
ggctccaagtaccacagcaagtacaagggaagcgtgtgcagggtatgcgaggtctgtgag
attggcaagcatggtagcgggttgaagcttttcgcataa
DBGET
integrated database retrieval system
