KEGG   Verticillium alfalfae: VDBG_07586
Entry
VDBG_07586        CDS       T02227                                 
Name
(RefSeq) histone demethylase JARID1A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
val  Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:val00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:val01009]
    VDBG_07586
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:val03036]
    VDBG_07586
Enzymes [BR:val01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     VDBG_07586
Protein phosphatases and associated proteins [BR:val01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     VDBG_07586
Chromosome and associated proteins [BR:val03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    VDBG_07586
SSDB
Motif
Pfam: PLU-1 JmjC ARID JmjN PHD zf-C5HC2 PHD_5 KIX zf-PHD-like zf_RING_Vps8
Other DBs
NCBI-GeneID: 9537520
NCBI-ProteinID: XP_003002127
UniProt: C9SRR1
LinkDB
AA seq 1560 aa
MVSAPTIGNAAVGGSASAPTSSRASPAVGAGKAKAGQVNSNGYHPTNPQIPLSSMTSLPL
DLSSVERRGQPTAAKEPMKKKNRPHGLEEAPTYCPTEEEWKDPFEYIRKITPEAKQFGLC
KIIPPDSWNPEFAIDTEDTQAGVELGRRKYAPPKTRTHTGNGLHRLTFAGTRANMSYLDA
LAKFHKQQGNNLHRLPYVDKKPLDLYRLKKAVEARGGFEKVCKGKKWAEIGRDLGYSGKI
MSSLSTSLKNSYQKWLCPYEDYLRVAKPGVHQQLELENGGPYTPTHGGPALTCLCSDPSG
PRPPRDENSTPGEKCETCGKADEAGPLHVCESCDHAYHGSCLDPPLKQKVDPEWNCPRCL
VGDGQYGFEEGGLYSLRQFQQKAADFKQGFFERKMPYDSVLKCHRPVTEEDVETEFWRLV
ADMEETVEVEYGADIHCTTHGSGFPTVEKHPKNPYSTDPWNLNLLPLHPESLFRHIKSDI
SGMMVPWVYVGMIFSTFCWHNEDHYAYSANYQHFGATKTWYGIPGEDAEKFEAAMREAVP
ELFETQPDLLFQLVTLLTPEQLKKAGVRVFALDQRAGQFVITFPQAYHAGFNHGFNFNEA
VNFAPCDWEPFGLSGVTRLRDFRKQPCFSHDALLWTAAEGTATNGLTIQTAKWLAPALER
IHERELAARADFISKHVQSQGHKCSLTGANNSDCPLAFEIEEADLPLEDDYLCSYCKAFS
YLSRFRCTKTGKILCLLHAGQHACCDVPESQRYLGEQHVLLYRRAEDVIAATFAKVLEKA
HTPEAWEEKYDKMLEEEATPSLKSLRALLHEGERIPYDLVSLPLLREFVDRCNEWVEEAT
NYTVRKQQNRRKSDKGLTNRKSSVADQKERDARDVSNIYRLLQEAEHIGFDCPEILQLRE
RADGIETFQKNANKALEHLHTATAEVIEELLEEGRSFNVDIPEVGRLSRILDQLNWNDKA
RRSRSVVLNLNEVKELIEEGQRLEIPSYNDHLTYYLDQMHAGQVWEKKARELIYAEAVHY
AQLEALSTQVTVNSLPVSQETLAAVDAILHKQREAHRQILDLTERSRHPDIRKRPKYTEV
AEIMRKLEDLNSKPNGTLDLGREQKRHEDWMREGKKLFGKTNAPLHILKSHMEYVLERNQ
DCFDIVNDKPRTPAEPASREASPEARASRFEDSRVREVFCICRKVEAGMMIECELCHEWY
HGKCLKIARGKVKDEDKYTCPICDWRLKVPRDAARPKLEDLLAWADKINNLPFQPEEEEV
LQQIIDNAQEFRNHVAGICNPLVSTKSEADTQRFYLRKIEGAEILLAYETNFFRQELHKW
CPVAPNPPPVLEVSKSTRKPRPTKLQKLLAQYGVDDPEDLPENMKQKAASLIRKAQNAEA
AANAHAAGVAASAAGARVPPGSRHSTTSKDDAMDIDSGPTLHPGLFMPNGNGGPQLVHDN
SSMSLEDRLNNGQEDGLNLLDPGQRSKALEILGRTDVGRKRAEEMYGPGVWNENKGLRQS
PATGATGGPQDERAVDKMFEDLTNHDDDGRKGREPFDGFVPTAESFENERNGMDALLDGE
NT seq 4683 nt   +upstreamnt  +downstreamnt
atggtttctgcgccgaccattggcaatgccgctgttggaggcagtgcaagcgcgcctacc
agctcacgcgcgtctccagctgtcggtgccggcaaggcgaaggccggccaggtcaactcc
aacggataccacccgacgaaccctcagatccccctgagctccatgacgagcctgccactc
gacttgtcgtcggtcgagcgacgcgggcagccgacggccgcgaaagagccgatgaagaag
aagaaccgaccacatggactcgaggaggcgccgacgtactgtccgaccgaagaagaatgg
aaggaccctttcgaatacattcgaaaaatcacacctgaggccaagcaattcggcctatgc
aagattattccacccgactcgtggaatcccgagttcgccatcgacacagaagacacgcaa
gcaggagttgaactcggtcgaaggaagtatgcgcctcccaagacacgcactcacacaggc
aacgggctccatcggctgacttttgcaggcacacgcgccaacatgtcctacctcgatgcg
ctcgccaagttccacaaacagcagggtaacaacctgcaccgtttaccctatgtcgacaag
aaacccctcgacctgtatcggttaaagaaggctgtggaggcacgtggcggctttgagaag
gtgtgcaagggaaagaagtgggctgaaattggccgcgatctcggatacagcggcaaaatc
atgtcctcattgtcgacatcgctcaagaactcgtaccaaaaatggctctgcccgtacgag
gactacctccgagtggcgaagcccggcgttcaccagcagctcgagctcgaaaatggcgga
ccttataccccgacccacggtggcccggctctcacatgtctctgttccgacccgtctggg
ccccgacccccacgtgatgagaactcaacgcctggcgagaaatgtgagacctgtggcaag
gccgatgaggcgggccctttgcacgtatgcgaatcgtgtgaccacgcttaccacggctca
tgtctggacccgccactgaagcaaaaagtcgaccccgaatggaactgtccgcgctgtcta
gtaggcgatgggcagtatggatttgaagagggcggcctttattcgctacgtcagttccaa
caaaaggctgccgacttcaaacaagggttcttcgaacgaaagatgccatacgattcggtc
ctgaagtgccaccgaccagtgaccgaggaggatgttgaaaccgaattctggcgcctagtt
gcagacatggaagagacggtggaggtcgagtatggtgccgacatccactgtacgacacac
ggctctggcttcccaaccgtagagaagcatccaaagaacccatactcaaccgatccttgg
aacctgaacctcttgccactgcatcctgagagtctgtttaggcatatcaagtccgacatc
tcgggcatgatggttccctgggtctacgtgggcatgatcttctcaacattctgttggcac
aacgaagatcactacgcgtactcggccaactaccaacacttcggcgcaacgaagacgtgg
tatggtatccccggggaagacgcggagaagtttgaagcggcgatgagagaggctgtgcct
gagctgttcgagacacagccggatttgctctttcagctcgtcacacttctgactccggag
caactcaagaaggctggcgtcagggtcttcgcgttggaccagagagccggacaatttgtc
attactttcccccaggcatatcatgctggcttcaaccatggcttcaacttcaacgaggcc
gtcaactttgccccctgcgactgggaaccgtttggtctttccggcgtgaccaggcttcgc
gacttcaggaagcagccatgcttttcgcacgacgcacttctctggacggcagccgaggga
acagcaacaaacggcctcaccatccagacggcaaaatggctagcaccagcacttgagcgc
attcacgagcgtgagctcgcagctcgagcagactttatctcgaaacatgttcagtcgcaa
gggcataagtgcagtctcacgggcgccaacaacagtgactgcccgcttgcgtttgagatt
gaggaagctgacctgcctttagaggatgactacctctgctcttactgcaaggcgttcagc
tatctatcgcgattcagatgcaccaagacgggcaaaattctttgcctgctacatgccggc
cagcatgcgtgctgcgacgtacccgagtcccagcgctatcttggtgagcaacacgtgctc
ctgtatcgcagggccgaagatgttattgccgcaaccttcgccaaggtgttggagaaggcg
cacacgcctgaggcctgggaggagaagtacgacaagatgcttgaggaagaggcgacaccg
tctctcaagtcgttgcgtgctcttcttcacgagggcgaacgcattccctacgatctcgtt
tcgctgcctttactgcgagagttcgtcgatcgatgtaacgagtgggtggaagaggcaaca
aactacactgtgcgcaagcagcagaaccggcgcaagagcgacaagggcctgacgaatcgt
aagagttccgttgcggaccagaaggaaagagacgcccgcgatgtgagcaacatttaccgc
ctgcttcaagaagcggaacacattgggttcgactgccctgagatccttcaactgcgcgag
cgagccgacggcatcgaaacgttccagaaaaacgcaaacaaggctttggagcacttgcac
acagccacggcagaagtcattgaggagctcctcgaagagggccgctctttcaatgttgac
atccccgaggtcggccgactgtcgcgtatcctcgatcagctgaactggaacgacaaggcg
cgccggagccgcagcgttgtcctcaatttgaatgaggtcaaagagctcatcgaagagggc
cagcgtctggagataccatcctacaacgaccatctgacttactatctcgaccagatgcat
gccgggcaggtatgggagaagaaggcgcgcgagctcatctatgcggaggctgtgcactac
gcccagttggaggccctctccacgcaggtcacggtcaattcgctaccagtctctcaggag
accctggccgctgtggatgccattctgcacaagcagcgggaagcccaccgccagatccta
gacttgaccgagagatcgcgtcatcccgacattcgcaaacgacccaaatacactgaagtg
gctgaaatcatgcgaaagctggaagacctcaactcgaagcccaacggtacgttggatctc
ggtcgcgagcaaaagcgtcacgaggactggatgcgcgagggcaagaagctattcggcaag
acaaacgcccctctgcatattctcaagagtcacatggaatatgtcctcgagcgcaatcag
gattgcttcgatattgtcaacgacaagccgcggactccagccgaacccgcatcgcgagaa
gcaagcccggaagccagggccagccgtttcgaagattctcgtgtgcgcgaagttttttgc
atctgtcgcaaggtcgaggccggcatgatgatcgagtgtgaattatgtcatgaatggtac
cacggaaagtgtctcaagattgctcgcggcaaggtcaaggacgaggacaagtatacctgc
cccatctgcgattggcgtctgaaggttccacgagatgccgcccgaccaaagctcgaggat
ttgcttgcgtgggccgacaagatcaacaaccttcccttccagccggaagaggaagaagtt
ctgcaacaaatcatcgacaacgcgcaagaattccgcaatcatgtcgcgggcatttgcaac
ccgctcgtgtcgaccaaatcagaggcagacacgcagcgattctatctccgcaagatcgag
ggtgccgagatcctcctcgcctacgaaaccaactttttcagacaggaattgcacaagtgg
tgccccgtcgccccgaacccgccgccggtactggaggtgtctaagagcacgcgcaagcca
cgccctacgaaattgcagaagctgctggcgcagtacggcgttgatgacccagaggacctt
cccgagaacatgaagcagaaggccgccagcttgatacgcaaagcacaaaatgccgaggct
gccgctaatgcccacgcagccggtgttgcggcgtcggcagccggggcacgggtccccccg
ggcagccggcattcgacaacaagcaaggacgatgccatggatatcgatagcggaccaacg
ctgcacccaggcctcttcatgcccaacggaaatggaggtccacagctggtccacgacaac
tcatccatgtcgttagaggatcgactcaacaacggccaggaggacggcctcaacctgctt
gatccgggccagaggagtaaggctctcgagatcctaggcaggacggatgtcgggcgcaag
agggccgaggaaatgtacggcccaggcgtttggaacgagaacaagggccttcgacagagt
ccagccacgggtgcaacaggaggacctcaagacgagcgcgctgtggataaaatgttcgaa
gacctgacgaaccacgacgatgacgggcgcaagggcagggaaccattcgacgggtttgta
ccgacagcggagagttttgaaaatgagcgcaacgggatggacgcgctgctagacggcgag
tag

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