Verticillium alfalfae: VDBG_07593
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Entry
VDBG_07593 CDS
T02227
Name
(RefSeq) transcription initiation factor TFIID complex 60 kDa subunit
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
val
Verticillium alfalfae
Pathway
val03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VDBG_07593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_07593
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_07593
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
VDBG_07593
Coactivators
SAGA/TFTC/STAGA complex
VDBG_07593
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
VDBG_07593
STAGA complex
VDBG_07593
TFTC complex
VDBG_07593
SAGA complex
VDBG_07593
SLIK complex
VDBG_07593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Bromo_TP
Histone
Motif
Other DBs
NCBI-GeneID:
9537527
NCBI-ProteinID:
XP_003002134
UniProt:
C9SRR8
LinkDB
All DBs
AA seq
398 aa
AA seq
DB search
MQLSQKIRRRKKPAGVPPIDYLVENVPWFNSVAITVLLVIFTTTKRGSSSVRAMYRATRN
QHLGNSSRIINAAAMAQPAQPETKLLWNPENVKDVAESVGISSLNEDALRVLTQDAEYRI
GQVVIEALRFMRAARRTTLTVGDIAQALRVLDVEPLYGYESTRPLRYGEASLGPGQPLYY
LEDEEVDFEKLINAPLPKVPRDMSFTAHWLAIEGVQPSIPQNPTHRRVPKPGVATERALI
ENTNLFLDPYANAIAAPVLTCLLGRKLGADDATKDQYELREFSASLLGKIALRYAASNHL
LRPKLVRTCLKFFMDPDKLPAAHYGAITGLAAAGGPEAVRVLVLKYLRAARANGVNGGPA
ATQTAELKEFIGPILGERIAGLGNKRLVEQVLEARTIQ
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgagtcagaaaataagaagaagaaaaaagcctgcaggtgttcctcccatcgac
tatctcgtggaaaatgttccatggttcaacagtgttgccatcaccgtccttctcgtcatt
ttcacaacaacaaagcggggtagtagctccgttagagcgatgtatcgcgccacacgcaac
cagcatctagggaacagctctcgcattatcaacgccgctgccatggcccaacctgcgcag
cccgaaacgaagctcctctggaacccagagaatgtcaaggatgtcgccgagtccgttggc
atttcttctctgaacgaagatgctcttcgcgttctgacgcaagatgccgagtaccgcatc
ggccaggttgtgattgaggccctccgcttcatgcgcgcggcgcgtcgcacaacccttact
gtcggcgatatagcacaagcccttcgcgttctcgatgtcgaacccctctacggatatgaa
tcaacgcgcccgctacgctatggagaggcaagcctcggtcccggccagccactttactac
ttggaggatgaggaggtcgacttcgaaaagctgatcaacgcgcccctgcccaaggtgccg
cgcgacatgagtttcactgcccactggctcgccattgagggtgttcaaccgtccatcccc
caaaaccccacgcaccgccgagtcccgaagccaggagttgctaccgaaagggctctcatc
gagaacacaaacctgttcctcgacccgtacgccaacgccatcgccgcgcccgtcctcacc
tgcctgctcggccgcaagctgggcgccgacgacgccacgaaggaccagtacgagctgcgc
gagttttcggcctcgctgctcggcaagattgccctgcgctacgccgcctccaaccatctc
ctccgccccaagctcgtccgcacgtgtctcaagttcttcatggacccggacaagctgccg
gctgcgcactacggcgccatcacagggctcgcggcggccggagggcccgaggccgtgcgc
gtgctcgtgctcaagtacctcagggcggcccgggcgaacggcgtcaacggtgggccggcg
gcaacgcagacggccgagctgaaggaattcatcgggcccatcctcggcgaaaggatcgcc
ggcttggggaacaagaggctcgtggagcaggtgcttgaggcgcggacgatccagtag
DBGET
integrated database retrieval system
