Verticillium alfalfae: VDBG_07792
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Entry
VDBG_07792 CDS
T02227
Name
(RefSeq) pelota
KO
K06965
protein pelota
Organism
val
Verticillium alfalfae
Pathway
val03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
VDBG_07792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_07792
Messenger RNA biogenesis [BR:
val03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
VDBG_07792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-GeneID:
9527327
NCBI-ProteinID:
XP_003002333
UniProt:
C9SSB7
LinkDB
All DBs
AA seq
398 aa
AA seq
DB search
MKLTSTKPSQYVAEDAVTLTAEDSEDMWHAYNLITAGDTVVAHAVRKVVSETKTGSTQSE
RVHTMLAIKVKSTFFDPIAGQLQVSGVVKSENAYVSLGQHHTLDLEIGRPFTLSKPEGWD
SVARDTLNEGLSDDKDGAMAAVVMQEGIANICLITQFRTVVKQRIESVVPKKRSAASDTS
EGMRKFYQKTLSNLLRTVNFDQPRPLLLASPGFIAVDFKKYIADEGRDKSDKKLSNIAKE
AIVVHTNSGHVHSLNEVLKSPEMGNKLKDFKFTKETKLMDTFFDKLRVDDGRAWYGTSSV
TKAVQEGAVGPGGGTLIMNNSLFRSSDIATRKQYVALVDKVKEDGGEVRILSSDHESGQR
LDMLGSVAALLSYPIADLDDEDADDADGVEGADDVQII
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcacgtcgacgaaaccttcgcagtatgtcgcggaagacgccgtcacactgacg
gccgaggactcggaagacatgtggcacgcctacaacttgatcacagccggcgacaccgtc
gtcgcacacgccgtccgcaaggttgtctccgaaacgaagaccggcagcacgcagtctgaa
cgagtgcacacaatgctcgccatcaaggtcaaatccaccttttttgaccccattgccggc
cagctgcaggtcagcggcgtcgtcaagtccgaaaacgcctatgtcagcctgggccagcac
cacaccctcgacctcgaaatcggccgccccttcacactgagcaagcccgagggctgggac
tctgtcgcgcgcgacacactgaacgagggcctttctgacgacaaggatggcgccatggcc
gctgtcgtcatgcaggaaggcattgccaacatttgcctgatcacgcagttccgcaccgtc
gtcaagcagcgcatcgagagcgtcgtgccgaagaagaggagcgccgcgtcagacacttca
gagggcatgcgcaagttctaccaaaagaccttgtcgaacctgttgcgaacggtcaatttt
gaccaaccgcggccgctgctgctggcgagccctggattcatcgctgtggatttcaaaaag
tacattgcggatgaagggcgtgacaagtcggacaagaagctgtcgaatatcgccaaggag
gccattgttgtgcacacaaattcgggtcacgtccacagcctcaacgaggtgctcaagagc
ccggagatggggaacaagctcaaggacttcaagttcaccaaggagactaaactcatggac
accttctttgataagttgagggtggacgacgggagggcgtggtacggcacctcgtcggtg
actaaggcggtgcaggagggtgcggtcggtccaggcggtggcacactcatcatgaacaac
tctttgttccgtagctccgatattgccacgaggaaacagtacgtggccctcgttgacaag
gtaaaagaagacggaggtgaggtcagaattttgagtagtgatcacgagagtgggcagaga
ctcgacatgctaggcagcgtagcagctctcctgtcgtatccgatcgcagacctcgacgac
gaggatgcagacgatgcagacggtgtcgagggcgcggatgacgtgcagataatatga
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