Verticillium alfalfae: VDBG_07851
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Entry
VDBG_07851 CDS
T02227
Name
(RefSeq) HIR1
KO
K11293
protein HIRA/HIR1
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_07851
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
VDBG_07851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
HIRA_B
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR75_2nd
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
9529646
NCBI-ProteinID:
XP_003001592
UniProt:
C9SSH6
LinkDB
All DBs
AA seq
1054 aa
AA seq
DB search
MHVIKPAWLSHSGEQKDYEVYSCHVSPDGKRLATAGGDGHVRIWSTEAIYGTNSDDNVGK
PRQLCHMSHHLGTIHSVRWSPNGRYLASGADDKLICVYHLDKNPPVASFGTGDAPPVENW
KTYKRLVGHDNDVQDIAWSYDSSILVSVGLDSKVVVWSGHTFEKLKTLAVHTSHVKGITF
DPANKFFATASDDRSIKIFRFTPPAPNATQHDMVNNFVVETTINAPFKSSPLTTYFRRCS
WSPDGNHIAAANAVNGPVSSVAIIERTRWDSEINLIGHEGPTEVCMFSPRLFHTVNPAEI
TDDNVGSLVTVIASAGQDKTLSIWNTNTSRPVVILQDLAGKSISDLSWTPDGQTLFAASL
DGAIIAVRFDTGELGWVANAEENDKALQKYGVSRKGMGIAEDVEGLQLENQSKAGESKAA
ESRMGALMGDLPAAAAPSANGIKTNGTNTSTPKPTNGHTEPEKEKEKENEKEPEADKEKE
KEKPEESADKTAERVKELKSRVTVGKDGKKRVAPLLVSSSGTGQMSMPQTQLVGSTSTAK
ASQNDAPLSILDLGKPVDGLPRGGIAAMLLGNKRKAIEMEPQEGDDPFAKRQATGPTPIV
VNGVDGVEPAAMVQAPHGIAPTPEFLRPAVLNPSITFAQIRLAVPKVRSHIVRPMERGVL
LSETTVEDAAKVPENIVLEARNPVQIKDPSQITATKRGTLLWQDYLSRAVILVTGNKHFW
AAACEDGSVYIWTPAGRRLVNAIVTEAQPVILESREHWLLCINAVGLCYVWNIESQSSPH
PPVSLGPILELATTTLNLNAATPGPGVTSAALNSTGHIVVTLTNGDGYYYAREMYTWQRI
SEAWWAVGSQYWNSNDSSISALQSTAVGPVTAPKDKDSSAATVSAGIIPHLERHTTNEFL
LKGRAYTLQRIVKTLLTRDGFEDFESTVSIAHLENRIAASLQMGARDEFRLYLFMYAKRI
GAEGLRLKVEELLNSLLGGILKDKKVQETKAKGWFSQENEICGWDRKELLKGVVMILGKF
RELQRLTVQYARVLDLTQTEDDVDDEDGAMDVEA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcattaagccagcctggctgagccatagcggcgagcagaaggactacgaagtc
tacagctgccacgtctcccccgacggaaagcggctcgcgacagctggaggcgatggccac
gttcggatctggtcgactgaagccatctatggcaccaacagcgatgacaatgtgggcaag
ccgaggcagctctgccacatgagccaccatctcggcaccatccactccgttcgatggtct
ccaaacgggcgatatcttgcttcgggcgccgatgacaagctgatttgtgtctatcacctc
gacaagaacccgcccgttgcttcctttggcaccggtgatgctccccctgtcgaaaattgg
aagacctacaagcgtctcgtaggccacgacaatgacgtgcaggatattgcctggtcgtat
gactcttctattctcgtctccgttggcctggactccaaagtcgttgtctggtcaggccat
acgttcgagaagttaaagacacttgccgttcacacaagccacgtcaagggcatcaccttc
gaccccgcgaacaagttcttcgcaaccgccagcgacgacaggtccattaaaatcttccga
ttcactcctcccgctcccaacgcgacgcaacacgacatggtgaacaactttgtggtggaa
acaactatcaacgcaccgttcaagagttcgcctctgacgacgtactttcggcgttgctcg
tggtcgcccgacggcaaccacattgcagctgcgaacgcagtcaatgggcccgtcagctct
gtcgccattatcgagcgtacgcggtgggacagtgagatcaacctcattggccacgagggt
ccaacggaagtctgcatgttttcccccaggctgtttcatacagtgaacccagccgagatc
acagacgacaacgttggctcgctggtgaccgtcatagcatcagctggccaggacaagacc
ctcagtatctggaacaccaacacttcgcggccggtggttattctgcaggacctcgccggc
aagtctatttccgacctgtcctggacccctgatggtcagaccctcttcgccgcaagtctg
gacggcgctattatcgcagtccgattcgatacgggcgaactcggttgggtcgcgaatgcg
gaggagaacgacaaggcgctgcagaaatacggcgtctcccgcaagggcatgggcatcgcg
gaggacgttgaagggctgcagctggagaaccagagcaaggcaggagagtccaaggcggca
gagtcccgcatgggcgccttgatgggtgaccttccagccgcagcagcgccgtctgcaaat
ggcataaagaccaacggtactaatacttcaacgccgaaaccgaccaatgggcatactgaa
cccgagaaggagaaggagaaagaaaatgagaaagagcctgaggcggacaaggagaaagag
aaagagaaacccgaagaaagcgccgataagacagctgaacgtgtgaaggaactgaagtct
cgagtcaccgtgggcaaagacggcaagaaacgggttgcgccactgttggtctcgtcatca
ggtactgggcagatgtcgatgcctcaaacacagctcgtcgggtcaacttccacggctaag
gcgtcgcagaatgacgcgcccttgtcaatactcgaccttggcaaacccgttgatggcttg
ccgcgaggtggcatcgccgccatgctgctcggcaacaagaggaaagctatcgagatggag
ccgcaagaaggagacgacccttttgccaagcgccaggcaacggggccaacgcccattgtg
gtgaatggtgtcgatggtgttgaacctgcggccatggtccaagcacctcacggtatcgcg
ccaactcccgagttcctccgaccagctgttttgaatccatccatcacctttgctcagata
cggcttgctgttccaaaagttcggtcacatatcgtgcggccaatggagcgaggtgtactg
ctgagcgagacaactgtcgaagacgctgctaaggttccggagaacattgttctcgaagcc
cgcaatcctgtgcagatcaaggatccatcgcaaatcacagccacgaagcgtggcaccctt
ctatggcaggactatctctctagggctgtcatcctcgtcactggcaacaagcacttttgg
gctgctgcctgcgaagatggtagcgtgtacatctggacccctgctggccgaagattggtg
aatgccatcgtcaccgaggcccagcctgtcatactcgagagtcgcgagcactggctacta
tgcatcaatgcggtcggtctctgttacgtttggaacatcgagagccagtcttcaccacat
cctcccgtgtctctaggtcccatcttggagctcgcgacaaccaccctaaacctcaacgcc
gctacgcctggccccggcgtcacctcagcagctctcaactcgacaggacacatcgttgtt
acgctgacaaacggagatggatactattacgcccgcgagatgtacacatggcaacgcatc
agcgaggcttggtgggccgtcggctcccagtactggaactccaacgactcttccatcagc
gcgctgcagtcgaccgcagttgggcccgtcacagcacccaaagacaaagactccagcgcg
gcaacggtttccgctggcattattccgcacttggagcgtcacaccaccaacgagttcctg
ctcaagggcagagcatacaccctgcagcgtatcgtcaagacgctcctgacacgggacggc
tttgaggactttgaaagtaccgtgagcattgcgcatctcgagaaccgaattgccgcctca
ctgcagatgggtgccagggacgaattccgtctatacctcttcatgtacgccaagcgaatc
ggcgccgaaggccttcggctcaaggtcgaggagcttctgaacagcctgctcggtggcatc
cttaaagacaaaaaggtccaagagaccaaggccaaggggtggttcagccaggagaatgaa
atttgcgggtgggaccgaaaagagctgctgaagggcgtcgtgatgattctgggtaaattc
cgagagcttcagcgcctgacggtgcaatatgctcgtgtactggacctaactcagaccgaa
gatgacgtcgatgatgaggacggtgccatggatgttgaagcgtag
DBGET
integrated database retrieval system