Verticillium alfalfae: VDBG_07867
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Entry
VDBG_07867 CDS
T02227
Name
(RefSeq) ATP-dependent RNA helicase MAK5
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
val03009
]
VDBG_07867
Enzymes [BR:
val01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VDBG_07867
Ribosome biogenesis [BR:
val03009
]
Eukaryotic type
Pre-60S particles
Helicases
VDBG_07867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
9529663
NCBI-ProteinID:
XP_003001608
UniProt:
C9SSJ2
LinkDB
All DBs
AA seq
787 aa
AA seq
DB search
MAPIQKNKRKAAPKTGPVDAPPKRQKLAVPKALALPKKRKAVAAEKLPWKKIDVPEMFDD
AEGFYALEAIEGIDVVRNGDKIEFHAVEEDLQKQAEDAAKANKDDDEFQGFSDAEAPPDT
TPAVDTKPAKLTKGAKKVAGLTDATNMTDVDPREEAAKAAENGDTADEKPKNKKDKRREK
QEKKKEKLEQKIKAQPVKKDAALESNVFSTLEEAEDDTEDLDMSEWMGLNLSPATIATIR
RLKFTKPTTIQCAAIPHIQAGHDVIGKASTGSGKTLAFGIPIVDKWLEKNGEEQDSAMET
DDAPEAKAPLALIISPTRELAHQIMNHIKELCAGLSKQPYVCSVTGGLSVYKQQRQLAKA
DIVVGTPGRLWEVLSTNTTVMESFKKIQYLVVDEADRILSEGHFKEAEEIFKALDRNVTE
EDDEDEQTLSPRQTLVFSATFHKGLQQKLAGKGKFGLMSEEESMEYLLKRLNFREEKPEF
VDVNPVSQMAEGLKEGMIECGAMEKDLYLYALILLNPNRRSLVFTNSISTVRRLTPMLAN
LNLNALPLHSQMPQKARLRSVERFTSTKPGTASILIATDVAARGLDIPGIDQVIHYHVPR
AADMYVHRSGRTARAATSGLSILLCAPEEVTPTRRLAAKVHHEQAGKNKYLIRTVDIDRK
LASRLKPRVDLAKKLADAVLAKEKGGKDDDWVKKAADELGVEYDSEELEKSGQWGGRGSQ
RKKKQEAARGVSKAEMGVMRAQLRELLSKRVNAGVSERYITGGKIDVEELLRGAKGDFLG
HVDGLDI
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccatacaaaagaacaagcgcaaggccgcaccaaagactggccctgtcgatgcc
ccgccgaagcgccagaagctcgccgtccccaaggctctggccctccccaagaaacgcaag
gctgtcgccgccgagaagctgccatggaagaagattgacgtccccgagatgttcgacgat
gccgagggcttctacgctctcgaggcaattgagggtatcgatgtcgtcaggaatggcgac
aagattgagtttcacgccgtcgaagaggacctccagaagcaagccgaagacgctgccaag
gcgaacaaggacgatgacgagttccaaggcttcagcgatgccgaggcccctcccgacacg
acacccgcggtcgacacgaagcccgcgaagcttaccaagggcgcaaagaaggtggccggc
ctgaccgacgcgacaaacatgaccgacgtcgaccctcgcgaggaggcggccaaggcggcc
gagaatggcgacaccgctgacgagaagccaaagaacaagaaggacaagaggcgggagaag
caggagaagaagaaggagaagctggaacagaagatcaaggcccagcccgtcaagaaagac
gccgccctggagagcaacgtcttctcgactctcgaagaggcggaagacgacacagaggac
ctcgacatgtcggaatggatgggccttaacctctcgcctgccaccatcgccacgatacgt
cgcctcaagttcacgaagccgaccaccattcagtgtgccgccattccccatatccaagcg
ggacacgatgtcatcggcaaggcttcgacaggttccggaaaaaccctggccttcggtatc
cccattgtcgacaagtggctcgagaagaatggcgaggagcaggactcggccatggagacg
gacgatgcgccagaggccaaggccccgcttgcccttatcatctcgcccacgcgcgagttg
gcgcaccagatcatgaaccacatcaaggagctctgtgccggtttgtccaagcagccttat
gtttgctccgtcaccggtggtctttccgtctacaaacagcagcgccagctggccaaggct
gatattgtcgtcggtacacctggtcgcctgtgggaggtcttgagcacgaacacgaccgtc
atggagtcattcaagaagatccagtacctcgtcgtcgatgaggcggatcgaatcctcagc
gaaggccatttcaaggaagccgaggagatcttcaaggctctcgaccgcaacgttacagag
gaggacgacgaggacgagcagacgctgtcaccacgccagacgctcgttttctcagccaca
tttcacaagggcctgcagcagaagctcgccggcaagggcaagttcggcctcatgtcggaa
gaggagtcaatggagtatctcttgaagcgactcaacttccgagaggagaagcccgaattt
gtcgatgtcaaccccgtgtcgcagatggccgagggcttgaaggaaggcatgattgagtgt
ggcgccatggaaaaggatctctatctatatgcgctgatcctcctcaacccgaaccgccga
tccctcgtcttcaccaactccatcagtaccgtccgccgcctgacacccatgctggcgaac
ctgaacctcaacgccctgcccctccactctcagatgccgcagaaggcgcgactccgctcc
gttgagcgtttcacctccaccaagcccggcacggcgtccattctcatcgccaccgacgtt
gccgcccgcggtctcgacattcccggcatcgaccaggtcatccactaccacgtgccccgc
gccgccgacatgtacgtccaccgctccggccgtaccgcccgtgccgccacctcgggcctc
agcatcctcctctgcgcccccgaagaggtgacgccgacgcgccgcctcgctgccaaggtc
caccacgagcaggccggcaagaacaagtacctcatccgcaccgtcgacattgaccgcaag
ctcgcctcgcgcctcaagccgcgcgtcgatctcgccaagaagctcgccgatgccgtgcta
gccaaggaaaaaggcggcaaggatgatgactgggtcaagaaggcggccgacgagctcggc
gtcgagtacgactcggaggagctcgagaagagcggccagtggggcggccgcggcagccag
cgcaagaagaagcaggaggccgcgcgcggcgtcagcaaggccgagatgggcgtcatgagg
gcgcagctgcgggagctgctgtctaagagggtcaacgctggcgtcagcgagcggtacatc
accggtggcaagattgatgtcgaggagctgctgaggggcgccaagggcgatttcctcggt
catgtggatggacttgatatttag
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