KEGG   Verticillium alfalfae: VDBG_07957
Entry
VDBG_07957        CDS       T02227                                 
Name
(RefSeq) hypothetical protein
  KO
K11763  chromatin structure-remodeling complex subunit RSC9
Organism
val  Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:val00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:val03021]
    VDBG_07957
   03036 Chromosome and associated proteins [BR:val03036]
    VDBG_07957
Transcription machinery [BR:val03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    RSC complex
     VDBG_07957
Chromosome and associated proteins [BR:val03036]
 Eukaryotic type
  Chromatin remodeling factors
   RSC complex
    VDBG_07957
SSDB
Motif
Pfam: ARID SEN1_N zf-C2H2_4 MADF_DNA_bdg
Other DBs
NCBI-GeneID: 9529755
NCBI-ProteinID: XP_003001698
UniProt: C9SST2
LinkDB
AA seq 911 aa
MAPETKYPPHEIDRTPEYEEFMTKLRAYHQQRGTTLDPEPKCSTVNLDLYKLFNLIVEEG
GYDEVSDRKLAWREMVEKLGIPMTSIASTAYQLKDRYLKNLAAYEISTIHGKESPPKDIL
EDGTAKGGSLLTEPEKTMQQTRCARRSGDAAHVARSLLAKDTLSAPASARAIERSPPQRV
ISSLTRPDSHRNASGAQTGQTSQTTSQHHSNSQKLGPSQYTRALPIGASHCRAHPKVAPK
LFQPLVLRPVDTPGNNPAEFARRRPLARQRLQPPELPHGTPGLRKDGAGIYHRCLMGLRS
KILAEQEYAVHHFVKISYERGDKFKFEQFAGLADALVEKALDVGTLFYDIKWEISWVPVP
NNAGPGVLDGENGTPDILDRISKLTPKPVSDLIQPAKFSDALRCISEAVLTIRNMVTLQD
NAHFVSDLQPLKDLICIILRLPTHNSIVELKHMALEITECLTPYMSLGSDDPLYQVLLEQ
LKSTDRGMILGGLRALGRISMKLANTNKLSNVPAETLESITRWLQLNDDDLMDACLDFLY
QYTAVAANIDDLLRFVSAESLVIHLVRLLSHGAKKVTREVVIVPELKTPPNDYAAPMPTD
LLQELLAISEPERCQAWVKCFFEEDKDSFVTQIMAWQAYQAAFVSALKSSGQTLITPADF
IRNATIVYKESRAEVLRVSNAGETQQKFIIQGLRARENPVGLDGKEFKRCIWDAAKQGVK
CGQHFASPQQMSVHILTHHLGIAKNAAGTFDNVELECRCQWGECRKFPEPTNMKLFQIAH
HISVHASIVFPRKTAADGDAAQALTRDWLKPAVTKSVDYEETAMVRDERNPNAPLQAAGI
PLSAALILRNIARNVPKTQAEAELLRHYEGGWNERLFRCVRPRLFELMGLNKGLAEYIAS
IIELVEPETDN
NT seq 2736 nt   +upstreamnt  +downstreamnt
atggcgcccgaaacaaaatatccccctcacgagatcgaccgcactcccgagtacgaggag
tttatgaccaaactgcgcgcctatcatcagcaacgaggtaccacgcttgacccagaaccc
aagtgctcaacagtaaatctcgatctttacaagcttttcaacctgattgtggaggaaggc
ggctacgacgaagtcagtgacaggaaacttgcctggcgcgagatggtcgagaagctcggc
atccctatgaccagcatcgcatccaccgcctatcaactcaaggaccgctacctgaaaaac
ctggccgcatacgaaatcagcactatccacggaaaagaatcccccccgaaagacatcctt
gaggacgggacggccaaaggtggatcgcttctgaccgaacccgagaaaactatgcagcag
actcgctgtgctcgccgctcgggagacgcggcacacgtcgcgcgatcgcttctggccaaa
gacacactgtcggctccagcttccgctcgcgcgattgagagaagccccccgcagagagtc
atctccagcctgacacggcccgactcgcaccgtaacgcctcgggagcacagactggacag
accagtcaaacgacgtcccagcatcactccaactcccagaagctcgggccaagccaatac
accagggcacttcccatcggcgcatcccactgccgtgcccatcccaaagtcgctccaaag
cttttccagcctctagtgctcagacccgtcgatacgccaggcaacaatcctgcagagttc
gctaggcgccgaccgctggcgcggcagaggctgcagccccccgagctgccccatggaaca
ccaggactgcgcaaggacggtgccggtatttaccaccgatgcctcatgggtctgcgatca
aagatcttggctgagcaggaatatgccgtacatcactttgtcaagatctcatatgaaaga
ggtgataagttcaagtttgagcagttcgcaggcctagcagatgcgctcgtcgaaaaggcg
cttgatgtcggcaccctgttttatgatatcaagtgggagatctcgtgggttccggtcccc
aacaacgctgggcccggcgtcctcgatggagagaacgggacgcccgatatcctcgaccgc
atcagcaaactcacccccaaacccgtctcagatctcatccagcctgccaaattttcagac
gcccttcggtgcatctccgaggccgtcctcacgattcgcaacatggtcacgctccaggac
aatgctcactttgtgtccgacctgcagccgctgaaagacctgatctgcatcatcttgagg
cttcccacacataacagcatcgttgagctgaagcacatggcgctcgagatcacagagtgc
ctcacgccttacatgtctctcggttcagatgatcccctctaccaggtgctcctagagcaa
ctcaagtcaacagaccgcggcatgattctcggcggacttcgcgccctcggccgcatctcg
atgaagctggccaacaccaacaagctcagcaatgtgcccgccgagacgctagagagcatt
acgcgctggctgcagctcaacgacgacgacttgatggacgcgtgcctcgacttcctgtac
cagtacaccgccgtcgccgccaacatcgatgacttgctacggttcgtcagtgccgaaagc
ctggtcattcacctcgtccgccttctctcgcatggcgcgaagaaggttacgcgcgaagtt
gtcattgtgcccgaactcaagacaccccccaacgactacgccgcaccgatgccgacagac
cttctgcaggagcttttggccattagcgagcccgagcgctgccaggcgtgggtcaagtgc
ttcttcgaggaggataaggactcgttcgttacgcagatcatggcctggcaggcctaccaa
gcagcatttgtgtcggctctcaagtcgtccggacagacgctcatcacgcccgcagatttt
atccgtaatgccaccatcgtctacaaggagtcgcgcgccgaggtgctccgcgtgtccaac
gccggcgagacgcagcaaaagttcatcatccagggcctgcgagcccgtgagaaccccgtc
ggcctcgacggcaaggagttcaagcgctgcatctgggacgccgccaagcagggcgtcaag
tgcggacagcactttgccagcccgcagcagatgagcgtccacattctaacacaccacctt
ggtattgccaagaacgccgccggcacctttgataatgtcgagctggagtgccgctgccag
tggggcgaatgcagaaagtttcccgagcccaccaacatgaagctcttccagatcgcgcac
cacatctccgtccacgcaagcatcgtcttcccgcgcaagacggcagctgatggtgacgct
gcccaggcgctgacacgcgactggctcaagcccgctgtgacgaagtcggtcgactacgag
gagacggccatggtgcgcgatgagcgtaaccccaacgcgccgctccaagccgccggcatc
ccgctgagtgcggctctcatcctgaggaacattgcccggaacgttcccaagacgcaggcc
gaggctgagctgctgcggcactacgagggcggttggaacgagcggctcttccgctgcgtg
cgcccgcggctgttcgagctcatggggctgaacaagggcctggccgagtacattgcctct
atcattgagctcgtggagcctgagactgacaactag

DBGET integrated database retrieval system