Verticillium alfalfae: VDBG_07957
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Entry
VDBG_07957 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K11763
chromatin structure-remodeling complex subunit RSC9
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_07957
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_07957
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
VDBG_07957
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
VDBG_07957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
SEN1_N
zf-C2H2_4
MADF_DNA_bdg
Motif
Other DBs
NCBI-GeneID:
9529755
NCBI-ProteinID:
XP_003001698
UniProt:
C9SST2
LinkDB
All DBs
AA seq
911 aa
AA seq
DB search
MAPETKYPPHEIDRTPEYEEFMTKLRAYHQQRGTTLDPEPKCSTVNLDLYKLFNLIVEEG
GYDEVSDRKLAWREMVEKLGIPMTSIASTAYQLKDRYLKNLAAYEISTIHGKESPPKDIL
EDGTAKGGSLLTEPEKTMQQTRCARRSGDAAHVARSLLAKDTLSAPASARAIERSPPQRV
ISSLTRPDSHRNASGAQTGQTSQTTSQHHSNSQKLGPSQYTRALPIGASHCRAHPKVAPK
LFQPLVLRPVDTPGNNPAEFARRRPLARQRLQPPELPHGTPGLRKDGAGIYHRCLMGLRS
KILAEQEYAVHHFVKISYERGDKFKFEQFAGLADALVEKALDVGTLFYDIKWEISWVPVP
NNAGPGVLDGENGTPDILDRISKLTPKPVSDLIQPAKFSDALRCISEAVLTIRNMVTLQD
NAHFVSDLQPLKDLICIILRLPTHNSIVELKHMALEITECLTPYMSLGSDDPLYQVLLEQ
LKSTDRGMILGGLRALGRISMKLANTNKLSNVPAETLESITRWLQLNDDDLMDACLDFLY
QYTAVAANIDDLLRFVSAESLVIHLVRLLSHGAKKVTREVVIVPELKTPPNDYAAPMPTD
LLQELLAISEPERCQAWVKCFFEEDKDSFVTQIMAWQAYQAAFVSALKSSGQTLITPADF
IRNATIVYKESRAEVLRVSNAGETQQKFIIQGLRARENPVGLDGKEFKRCIWDAAKQGVK
CGQHFASPQQMSVHILTHHLGIAKNAAGTFDNVELECRCQWGECRKFPEPTNMKLFQIAH
HISVHASIVFPRKTAADGDAAQALTRDWLKPAVTKSVDYEETAMVRDERNPNAPLQAAGI
PLSAALILRNIARNVPKTQAEAELLRHYEGGWNERLFRCVRPRLFELMGLNKGLAEYIAS
IIELVEPETDN
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgaaacaaaatatccccctcacgagatcgaccgcactcccgagtacgaggag
tttatgaccaaactgcgcgcctatcatcagcaacgaggtaccacgcttgacccagaaccc
aagtgctcaacagtaaatctcgatctttacaagcttttcaacctgattgtggaggaaggc
ggctacgacgaagtcagtgacaggaaacttgcctggcgcgagatggtcgagaagctcggc
atccctatgaccagcatcgcatccaccgcctatcaactcaaggaccgctacctgaaaaac
ctggccgcatacgaaatcagcactatccacggaaaagaatcccccccgaaagacatcctt
gaggacgggacggccaaaggtggatcgcttctgaccgaacccgagaaaactatgcagcag
actcgctgtgctcgccgctcgggagacgcggcacacgtcgcgcgatcgcttctggccaaa
gacacactgtcggctccagcttccgctcgcgcgattgagagaagccccccgcagagagtc
atctccagcctgacacggcccgactcgcaccgtaacgcctcgggagcacagactggacag
accagtcaaacgacgtcccagcatcactccaactcccagaagctcgggccaagccaatac
accagggcacttcccatcggcgcatcccactgccgtgcccatcccaaagtcgctccaaag
cttttccagcctctagtgctcagacccgtcgatacgccaggcaacaatcctgcagagttc
gctaggcgccgaccgctggcgcggcagaggctgcagccccccgagctgccccatggaaca
ccaggactgcgcaaggacggtgccggtatttaccaccgatgcctcatgggtctgcgatca
aagatcttggctgagcaggaatatgccgtacatcactttgtcaagatctcatatgaaaga
ggtgataagttcaagtttgagcagttcgcaggcctagcagatgcgctcgtcgaaaaggcg
cttgatgtcggcaccctgttttatgatatcaagtgggagatctcgtgggttccggtcccc
aacaacgctgggcccggcgtcctcgatggagagaacgggacgcccgatatcctcgaccgc
atcagcaaactcacccccaaacccgtctcagatctcatccagcctgccaaattttcagac
gcccttcggtgcatctccgaggccgtcctcacgattcgcaacatggtcacgctccaggac
aatgctcactttgtgtccgacctgcagccgctgaaagacctgatctgcatcatcttgagg
cttcccacacataacagcatcgttgagctgaagcacatggcgctcgagatcacagagtgc
ctcacgccttacatgtctctcggttcagatgatcccctctaccaggtgctcctagagcaa
ctcaagtcaacagaccgcggcatgattctcggcggacttcgcgccctcggccgcatctcg
atgaagctggccaacaccaacaagctcagcaatgtgcccgccgagacgctagagagcatt
acgcgctggctgcagctcaacgacgacgacttgatggacgcgtgcctcgacttcctgtac
cagtacaccgccgtcgccgccaacatcgatgacttgctacggttcgtcagtgccgaaagc
ctggtcattcacctcgtccgccttctctcgcatggcgcgaagaaggttacgcgcgaagtt
gtcattgtgcccgaactcaagacaccccccaacgactacgccgcaccgatgccgacagac
cttctgcaggagcttttggccattagcgagcccgagcgctgccaggcgtgggtcaagtgc
ttcttcgaggaggataaggactcgttcgttacgcagatcatggcctggcaggcctaccaa
gcagcatttgtgtcggctctcaagtcgtccggacagacgctcatcacgcccgcagatttt
atccgtaatgccaccatcgtctacaaggagtcgcgcgccgaggtgctccgcgtgtccaac
gccggcgagacgcagcaaaagttcatcatccagggcctgcgagcccgtgagaaccccgtc
ggcctcgacggcaaggagttcaagcgctgcatctgggacgccgccaagcagggcgtcaag
tgcggacagcactttgccagcccgcagcagatgagcgtccacattctaacacaccacctt
ggtattgccaagaacgccgccggcacctttgataatgtcgagctggagtgccgctgccag
tggggcgaatgcagaaagtttcccgagcccaccaacatgaagctcttccagatcgcgcac
cacatctccgtccacgcaagcatcgtcttcccgcgcaagacggcagctgatggtgacgct
gcccaggcgctgacacgcgactggctcaagcccgctgtgacgaagtcggtcgactacgag
gagacggccatggtgcgcgatgagcgtaaccccaacgcgccgctccaagccgccggcatc
ccgctgagtgcggctctcatcctgaggaacattgcccggaacgttcccaagacgcaggcc
gaggctgagctgctgcggcactacgagggcggttggaacgagcggctcttccgctgcgtg
cgcccgcggctgttcgagctcatggggctgaacaagggcctggccgagtacattgcctct
atcattgagctcgtggagcctgagactgacaactag
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