Verticillium alfalfae: VDBG_08134
Help
Entry
VDBG_08134 CDS
T02227
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
val
Verticillium alfalfae
Pathway
val04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
VDBG_08134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
val04121
]
VDBG_08134
Enzymes [BR:
val01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
VDBG_08134
Ubiquitin system [BR:
val04121
]
Ubiquitin ligases (E3)
HECT type E3
VDBG_08134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
TetR_C_15
IQ
Motif
Other DBs
NCBI-GeneID:
9529853
NCBI-ProteinID:
XP_003001875
UniProt:
C9STA9
LinkDB
All DBs
AA seq
1133 aa
AA seq
DB search
MHSTFTGNSRRTRNVNLSGQNQNPFANVWSPSASSGASKTVSNAQAERQQRQLERDRLKA
ARNIQRTWRSHHVRRQCRDVWRQAFDDIYRVDNPNTAVQRVHAALPLLLAAFQSNRPEDV
HRLAYIARDVMSQHVRSLVPASENQSSREQEDHRLRRLSEITVEALGATTMETFLQPESK
LLVDLLAYLVAGQPQSVMQVLSQYFRLLATLVRASASDQQQLEKVLVLVLAPLNKPPQYV
SAEDARPFTTRAYDAFAFDFLAVGDIAPLQQENNLIAQRIDIDKLSGAIIEAYSGPRAAA
ATPDSLLWLLAYYIDIHQTQKSTSHHLGSLHAMHLQLSSLASQIRFRLPLASNGTSRNTE
RANDGTESMLRPLPPYVSTKLTSCVDRAGITDILSDLARSVLVELTQRQRANCSSTFAPE
SNATSASPNNKSFQGASLLAGYIVTLLRCFPTFADDIRMRLFLGDIPSTGGNIPVIKYLW
QTMSQTSLFERICHDKGSAHAVELGICPALLHQRDPSGSCSKASPHPTDWIHSLASLKGQ
KASNKGRRTSLGPNGLSFDKPDLAGLRAIVTSTLRMLYERDSRRPFLPRDHWLMTSKFDM
EKFASSVVREHDRQQEELANLSEDEDQDEEDDMDDDVEMENGVHTFAGQRLSQHAQIENI
RARQRRAQKARMLSVIGPKLEILRHMPFVIPFDARVHIFRQFIYLDQQKRRQGMDAEQWR
MTMINNPLLPQRGLTGRHRGSIKRGQEFDDAFEQFYELGESLKEPVQIQFIDSFGDVEAG
IDGGGVAKEFLLSAINQVFMNQSEDRYFVENNQKLWYPNPIIFDKFREEAEEMGLPEAEK
KDILTGLSQRYEFLGRLVGKCMYEDILIDVNFAGFFLLKWAASGLTGEESYRGNVNDLRD
LDASLYQGLVHLKNLPADEVESLSLDFTVDDQISADGETVRSLTRELIPGRGSTPVTKDN
RLLYISYMARHRLVVQPAQQTMAFLRGLRAIVAPTWLSMFNQTELQRLVGGDSSEISIDD
LRDNTNYSGLYVIGDDGEEHPTIQLFWKVVRGFTDAQRRDLLKYVTSTPRAPLLGFGSLN
PLFSIRDGGTDEARLPSASTCVNLLKLPRYTDEETLRRKLVLAISSGAGFDLS
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcactcgaccttcacgggcaactcccgccgaacccgaaatgtcaacctgagtggccaa
aaccagaacccctttgccaacgtttggtcgccgtcagccagttctggggcttccaagaca
gtgtcaaacgcccaagctgagcggcaacagagacaattagaacgagaccgcttgaaggct
gcgaggaacatccaacgaacatggaggagccaccacgtcagaagacaatgccgggatgtc
tggcgccaagccttcgatgacatttaccgtgttgacaacccgaacactgctgtccagaga
gtgcatgcggctttgccgctgctgcttgctgcctttcagagcaaccgacccgaggacgtg
catcggctagcttatatagcacgagatgtcatgtcccagcatgtacgctctttagtccca
gcatcagaaaatcaatcaagtagagagcaagaagaccatcgtctgagacgattgtctgag
ataactgtcgaggccctgggggcaacaactatggaaacatttcttcaaccagaatcgaaa
ctccttgtcgatctcctagcctacctggtcgctggacaacctcagtctgtcatgcaggtt
ctctcccagtacttccgactcctagcaacactggtgcgtgcttctgcctcagatcagcag
cagctcgagaaggtcctggtacttgtgttggctcctttaaacaagcccccccagtatgtt
tctgccgaggacgcccgtccattcacaacccgcgcctatgatgcatttgctttcgatttc
ctcgcagtaggggatatagctcctctacaacaggagaataaccttattgcgcaacgcatc
gacatcgataaactctcaggagccataatcgaagcatactccgggccccgggccgccgca
gcaacgccagatagtttactttggcttctcgcctactatatagacatacatcagacgcaa
aagagcacatctcaccaccttggctcgttgcatgccatgcaccttcagctgtcaagtctg
gcttctcagattcgatttcgattaccattggcaagcaacggaacgtcacgaaacaccgag
cgagcgaatgatggcacagagtccatgctccggccactgccgccttatgtttcgaccaag
cttacctcctgcgtggaccgagccggtattactgatatcctgtcggatctggccaggtca
gttttagtcgagcttacacaacgacagagggctaactgcagcagcactttcgcccccgag
tcaaacgcaacttctgcttcccctaataacaaaagcttccagggtgcaagcctcttggca
ggctacattgtcacgcttctgcggtgctttccgacgttcgctgatgacattcggatgcgc
ctgtttttgggagatattccctcaacaggcggaaatatccccgtcatcaagtacctttgg
caaacaatgagccagacatcgctctttgagcgcatctgccatgataaaggatccgctcac
gcagtcgaacttggcatttgccctgcattattacaccaacgagatccttcaggatcttgc
tccaaagcctcgcctcatccaacggattggattcattctttggcttcgctgaaaggtcag
aaagcctccaacaaggggagacgcacatccctgggtccaaacggcctatccttcgacaag
cctgatctagcaggattgagggctatcgtgacgtcaacgttgcgcatgctctacgaacgg
gactctcgacgtccgtttttaccccgggaccactggctcatgacctccaaatttgacatg
gaaaagtttgcgtcgagcgtggtgcgggaacacgaccgccaacaagaagagctggccaac
ttgtcagaggacgaggatcaagacgaggaagacgacatggatgatgacgtggagatggaa
aatggcgtgcatacgttcgccggtcagcgcttgtcacagcacgcgcaaatagagaacatt
cgagctcgtcagagacgagcccagaaagctcgcatgctatccgtcatcggacccaaacta
gagatcctgcggcacatgccttttgtgatccctttcgatgcccgggtccacatcttccga
cagttcatctacctcgatcaacaaaagaggagacaaggcatggacgccgagcagtggcgg
atgaccatgatcaacaatccgctcttgccccagagaggtctgaccggacgtcatcgtgga
agcatcaagagaggacaagaattcgacgatgcgtttgagcagttctacgaactaggcgaa
agcctcaaggagccagtccagattcaattcatcgacagctttggcgatgtcgaggcaggc
atcgacggaggaggtgtcgctaaggaatttctcctcagcgccattaatcaggtgttcatg
aatcagtctgaagaccgatactttgtcgaaaataatcagaagctgtggtatccgaacccg
atcatcttcgacaagttcagagaagaagccgaggagatgggcctccctgaagctgagaag
aaggatatcctgaccggactctcacagaggtacgagtttctgggacgcctcgtcggtaaa
tgcatgtatgaggatatcctcattgacgtcaactttgccggattcttcctactcaagtgg
gcagcttccggtctgacaggcgaggagagctaccggggcaacgtgaacgacttgcgtgac
ctcgatgctagcttgtatcagggtttggtgcatctcaagaatctacccgcagacgaggtg
gagtcactgagccttgactttacagtcgatgatcagatctcggcggatggcgagacggtg
cgcagtctgacaagagagctcattcccggcaggggttcgacgcccgtcaccaaggacaac
agactgctctacatatcgtacatggcgcgtcaccgactcgtggtgcagcccgcccagcaa
acgatggctttcctgcgcggtctacgcgccatcgtcgcgccgacctggctctccatgttc
aaccagactgagctgcagcgcctcgtcggcggcgactcgtccgagattagcattgatgat
ctgcgcgacaacacaaactattcgggactctacgtcatcggcgacgatggcgaggagcac
ccgacgatccagctcttctggaaggtcgtgcgtgggttcacggacgcccagcgacgcgat
ctgctcaagtacgtcacgtcgacgccgcgtgcgccgctgctggggttcgggtcgctgaac
ccgcttttcagcattcgcgacggcggcaccgacgaggcccggctgccgagcgccagcaca
tgcgtgaacctgctcaagctgccgcggtatacggacgaggagacgctgcggcgcaagttg
gtcctcgcgatttcgtcgggcgctggattcgatctgagctga
DBGET
integrated database retrieval system
