KEGG   Verticillium alfalfae: VDBG_08235
Entry
VDBG_08235        CDS       T02227                                 
Name
(RefSeq) DNA-directed RNA polymerases I
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
val  Verticillium alfalfae
Pathway
val03020  RNA polymerase
val03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VDBG_08235
  09124 Replication and repair
   03420 Nucleotide excision repair
    VDBG_08235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:val03021]
    VDBG_08235
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_08235
Transcription machinery [BR:val03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     VDBG_08235
  RNA polymerase III system
   RNA polymerase III
     VDBG_08235
  RNA polymerase I system
   RNA polymerase I
     VDBG_08235
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VDBG_08235
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 9534584
NCBI-ProteinID: XP_003001190
UniProt: C9SUL5
LinkDB
AA seq 152 aa
MTTTGGDVTLFEESFTITNFDQSKYDRVARISATSADNQTVMTLDINIELFPCAVSDNLH
VVLATSLAHDGSKDEEKGWRDVAKGSGGGAEATLADMFDYVCHGKIYKFEDADDGQIIKA
YVSFGGMLMSLEGPYKKLTPLRVDYTYLLIKK
NT seq 459 nt   +upstreamnt  +downstreamnt
atgacgactaccggcggcgatgtgacactcttcgaggagagcttcactattacgaatttc
gaccagtccaagtatgaccgtgttgctcgcatctcagcgacatcggcagacaaccagacc
gtcatgaccctcgatatcaacattgagttgttcccctgtgcggtgtctgacaacttgcac
gtcgtactggcaacctccttggcgcacgatggaagcaaggacgaggagaagggctggcgg
gatgtggccaagggatctggtggtggcgcagaagcgacactggcggacatgttcgattac
gtgtgccatgggaaaatctacaagtttgaagacgccgatgatggtcagatcattaaggcg
tacgtctcatttggaggcatgctcatgtctctggagggtccatacaagaagcttacgcca
ctgcgcgtcgactacacatatctcctgattaagaaataa

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