Verticillium alfalfae: VDBG_08302
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Entry
VDBG_08302 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K14861
nucleolar pre-ribosomal-associated protein 1
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
val03009
]
VDBG_08302
Ribosome biogenesis [BR:
val03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
VDBG_08302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Npa1
NopRA1
Motif
Other DBs
NCBI-GeneID:
9529304
NCBI-ProteinID:
XP_003001257
UniProt:
C9STN1
LinkDB
All DBs
AA seq
1104 aa
AA seq
DB search
MVKRQLRDADAASAGRKRQRIVVETPTHEDVNNARQLRQLLAFDQDVKRARHGIQSFKVF
LDSFSATPSENHDRFAILSEYLESTKPRIFTEATVYQTDLMEMWGYASGIHNESITAAVP
AVLALLLQVISSSLELLPHATGIGQTLLQDRHLKLISRNLSASKSSGYIISPTMRLLREV
ASIDGGALAKKVFRARDHTFASFARNLEVRNSLEAGPEDPAKPSVRTNAIKLFLTSLKFL
PSDSKKELLLQKEVMSHLTFLLKDDPAYLLVEMLEALRRHVLADDKVPREAKFKAFNTKT
LDRLAGLYYYKHDDEVEGRLTVKDAVHRFLTYVCTTPGAGILYTGTGMYPKDLDDEATQD
VKDTDDFAFERAAWVDRYTEEVPVANFVLDEFIQKMRPWSSLRHSELLVSVFEAAPELVA
SYFLANKSFSFEPKLSMTWIGYAAFLFNTVQLPIPRYFGNRSGYRRVPPPTMVLLDNIMP
LPLKQKDLIRSLSHDAHLISFFAVRILVLALQKLDRALHMHREAAGTNKTIWDSAARKLV
DEFCQRIPDMKEVTKCYKTIPEANVLQREATSRLLLLYYEVIPQMALMANFDVSPFLLNA
LRRLDEQKENEQEKALGLMELENLLAIAGYSPGMRWFAKSEALAASPFVALLRVYVTSSQ
GHALTKLKEVLQFVATQNSLSRRRLGWASCSARRKSCARRTSSRFGSFSTTAPTEWGPIS
LLLVTMAEQIPFAVKEASADVVELFAKVLSSLLGYAKAANEDPAIIDLLAQRFNKAFAGT
TSQVKAKFKGALLEGDLATANGHSGTAVSRPTPTTTGQTAVKELDDAALEAALHVSFEPE
EDNSALLKWASKTVDDLIDGDYIPALIRLLWSPHTSIRQEALTNILKLAAKLKESSYEEK
DQLWLLLSELAESSRPLVGAGPVASPLVAFALHSLDILKNPLHCLYAKVNTYLTRAPLWA
PDKVPLAHDILHGAPSEDDRYYAELTWLLQYLLDGLRAPGDVAVLHHRKWFEKILALAAN
PYLRTNLTTRVLRIVYRATCVDGGSTTLATRFGVVSWLAAQEAGAGGDEAALCRALRRRV
WETCDQARVGAWSRGGIAEEQQVG
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagcgacagcttcgtgacgccgacgccgcttctgccggccgcaagcgccagaga
atagttgtcgaaacaccgacccatgaggacgtcaacaatgcgagacagctgaggcagctg
cttgcctttgaccaggacgtcaagcgcgcgaggcatggcattcaatccttcaaagtcttc
ctcgacagcttcagcgccacccctagcgagaaccatgaccgcttcgccatcctgtccgaa
tacctcgagtcgacgaagccgcgaatcttcaccgaagcgaccgtctaccagaccgacctc
atggagatgtggggctacgcttcgggcattcacaacgagagcatcacggcggccgtccct
gccgtgctggcgctgctgctgcaggtcatctcgagctccctcgagctcctcccccacgcg
accggcatcggccagaccctgctccaggaccgccatctcaagctcatctcgcgcaacctc
tcggcgtcgaagagcagcggctacatcatctcgcccacgatgcgcctgctacgcgaggtg
gcgtccatcgacggcggtgcgctcgccaagaaggtgttccgcgcccgcgaccacacgttt
gcctcgtttgcgcggaacctcgaggtccggaactcgctcgaggccgggcccgaggacccc
gccaagccttcggtccgcacaaacgccatcaagctgttcttgacgagcttgaagttcctg
ccgtcggactccaagaaggaactgctcctgcagaaggaggtcatgtcccacctgaccttc
ctgctcaaggacgatccggcctacctcctcgtcgagatgctcgaggctctgaggagacac
gtcctcgccgacgacaaggtgccgcgcgaggccaagttcaaggccttcaacaccaagacg
ctcgatcgcctggcgggcctctactactacaagcacgacgacgaggtcgagggccgcctg
acggtcaaggacgccgtgcaccgcttcctgacctacgtctgcacgacccccggcgccggt
atcctgtatacgggcacgggtatgtaccccaaggacctggacgacgaggccacacaggac
gtcaaggacacggacgactttgcctttgagcgcgccgcctgggtggacaggtacacggag
gaggtgcccgtggccaactttgtgctcgacgagttcatacagaagatgcgcccctggtcg
agcctgcgacacagcgagctgctcgtgtccgtgttcgaggcggcgcccgagctcgtcgcc
agctacttcctcgccaacaagtccttctcctttgaacccaagctctccatgacctggatc
ggctacgcggcctttctcttcaacacggtgcagcttccgatccccaggtactttggcaac
cgatctggctatcgccgcgtccccccgccgaccatggtgctgctcgacaacattatgccg
ttgccgctgaaacagaaggacctcatcaggagcctctcgcacgacgcacatctcatttcc
ttctttgccgtacgcatcctggtcctcgcgttacagaaactggaccgggcgctgcacatg
cacagggaagcagcgggcacgaacaagacgatatgggactcggcggcgcgcaagctcgtg
gacgagttttgccagaggataccggacatgaaggaggtcacaaaatgctacaagaccatt
cccgaggcgaacgtcctgcagagggaggcgacgagccgcctgctgctgctgtactacgag
gttattccccaaatggcgctcatggccaactttgacgtctcgcccttcctcttgaacgcc
ctccgccgactggacgagcagaaagagaacgagcaagaaaaggcgctcggtctcatggag
ctcgagaacctgctcgccattgccggctactcccccggcatgaggtggttcgccaaatcc
gaggccctcgccgcctcgcccttcgttgctctcctccgtgtctacgtcacgtccagccag
ggccatgcgctgaccaagctgaaggaggtgctccagttcgtcgcgacgcagaacagcttg
tccaggcgccgactgggttgggcctcctgttccgcacgccgcaagagctgcgcaagaagg
acctcaagccgttttgggtctttctcgacaactgcgccaacagaatggggccccatcagc
ttgcttctggtgaccatggcggagcaaataccctttgccgtcaaggaggctagtgctgat
gttgttgagctctttgccaaggtgttatcatcacttctcggttatgccaaggcggcgaac
gaggaccccgccatcatcgacctgctggcgcaacgattcaacaaggctttcgccggtaca
acgtcacaggtcaaggctaagttcaagggcgccctgctcgagggcgatctggcgacagcg
aacggccacagcgggacggccgtctccaggcccacgcccacgacgacaggccagaccgcc
gtcaaggagcttgacgacgcggccctcgaagcagctctccacgtcagctttgagcccgaa
gaagacaactcggccctcctcaagtgggcgtcgaagacggtcgacgacctcatcgacggt
gactacatacccgccctcatccgcctcctctggtcgccgcacacgagcatccggcaagaa
gcgctcaccaacattctcaagctcgcggccaagctcaaagagtcgtcgtacgaagaaaag
gaccagctctggctccttctctcggagctcgccgagtcttcgcggcccctcgtcggcgcc
ggccccgtcgcgtccccgctcgtggcgttcgcgctgcacagcctagacatcttgaagaac
ccgctgcactgcctctacgccaaggtcaacacgtacctgacgcgcgcgcccctctgggcg
ccggacaaggtgccgctcgcgcacgacattctgcacggcgcgccgtccgaggacgacagg
tactacgccgagctgacgtggctgctgcagtacctcctcgacggcctccgcgcgcccggc
gacgtcgccgtgctgcaccaccgcaagtggttcgagaagatcctcgcgctggcggcgaac
ccgtacctgcggacgaacctgacgacgcgcgtgctgcgcatcgtgtaccgcgccacgtgc
gtcgacggcggcagcacgacgctcgcgacgcggttcggcgtcgtcagctggttggcggcg
caggaggcgggcgcgggcggcgacgaggcggcgctgtgcagggcgctgcggaggcgggtc
tgggagacgtgtgatcaggcgcgtgtcggggcgtggagtcggggcgggatcgcggaggag
cagcaggttggatga
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integrated database retrieval system