Verticillium alfalfae: VDBG_08319
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Entry
VDBG_08319 CDS
T02227
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
val
Verticillium alfalfae
Pathway
val03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VDBG_08319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_08319
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
VDBG_08319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
9529322
NCBI-ProteinID:
XP_003001274
UniProt:
C9STP8
LinkDB
All DBs
AA seq
721 aa
AA seq
DB search
MSAPPSGLPNGQAQDQKPNPTGQQPRPPPIKRRAKGDPLVARRRPQPKPNAPRPQGAGAA
SSSRATPPSAALRPEVHTAGLLARITNNRTKTAANGGWTEPLPPGGREWKIVTTKRALME
GTRHHVMRFSSSRIEKEKLHIDPTDQNDFTRPVTLQRRDPRQPAAGREVKPEEEEPEPEP
NPEDEKEAERIAQLKAEKDAWKAMEAAKSAPAIKDPNASTRTKQPKQEDRGVQFHRAPRS
EKERKQQSLRYEEALPWHIEDADGKHVWVGSYVAPLSETTVCLVATTDGKFAMTPLEKWY
KFQPKPNFTTMRIEEAEALMKQQSGVSRWHMQAQEKKAGQKDLEDWRKFKNGPSRIKTES
STFRGVSKSEKMDHDEIDFEGDEFQDDDEAPNFEPDNDEDQKESAERIKREQLGANVFGE
GDEGKVDQEELETRLLEESRKREGKTINKALVKREKETIYKKDSDDEDGNRYFGPSDEED
SDDESKDGEDEAKKDEDKASSQDPSAQSQDANGAKDKDANSKGTLTPSGKQKEADAARKG
KSLKRPGSPNLSESSETESTLRKKKLKKNGSSVQVSRSGTPLPSGHKHKVGMSSMSDGEA
TGGEMSDGQQRKKKIKLLGTGARSTPTGSRAGSPAPAGAAGSTLRPLEESMDQADKTTQV
HRRRARIRVPAHPPDPGPLNPGRSSQRCRRRAYRQKNSTDASTNALVMDQARHPKLDGST
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccaccctctggtctgcccaacggccaggcccaggaccagaaacccaacccg
accgggcagcagccgcgaccgccccctatcaagcgacgagccaaaggcgatcctctcgtc
gcgcgtagacgaccgcagcccaaacccaatgctccgcggccgcaaggtgcgggcgccgct
tcctcgagtcgcgcgacacctccctctgcggcgctgaggcccgaggtccacaccgctggc
ctcctggctcgcatcacaaacaaccgaaccaaaacggcggcgaacgggggttggacggag
ccgctgccgccaggcggtcgcgagtggaagattgtcacgaccaagcgtgccctgatggaa
ggcacccgtcaccacgtcatgaggttctcgtcatctcgcatcgagaaggagaagctacac
attgatcccacggaccaaaacgatttcacgcgacctgtgacccttcagcgtcgcgaccca
agacagcccgctgctggacgagaggtgaagcccgaggaggaagagcccgaacctgagccc
aacccagaggacgagaaagaggccgagaggattgcgcagctcaaggccgagaaggatgcc
tggaaggccatggaggctgccaagagtgcgccggcgatcaaggaccccaatgccagtacg
cgtaccaagcagccgaagcaggaggaccgcggtgtgcagtttcaccgcgcaccccggtcg
gagaaggaacgcaagcagcaatcgctgcgttatgaggaagcgctgccctggcacattgag
gacgccgacggaaagcacgtgtgggttggttcatacgtcgcccctctgtcggagacgaca
gtttgtctcgtggccacgacagacggcaagtttgccatgaccccgcttgagaaatggtat
aaattccagcccaagccgaatttcaccacgatgagaatcgaagaggccgaggccttgatg
aagcagcaatcaggcgtgtctcggtggcacatgcaggcgcaagagaagaaggcaggacag
aaagacctcgaggattggagaaagttcaagaacggaccgtcgcgtatcaagacggagagt
tcgacattcaggggcgtatccaagtcggaaaagatggaccatgacgaaattgatttcgag
ggcgatgaattccaagacgacgacgaggcgcccaactttgagcccgacaacgacgaagat
cagaaggagtcggccgagcgcatcaagcgcgagcagctcggcgccaacgtgttcggagag
ggcgacgagggtaaggtggaccaggaagagctcgagacccggcttctcgaggagagcagg
aagagggaaggcaagaccatcaacaaagcattggtcaagcgagaaaaggaaaccatctac
aagaaggactcggacgatgaagacggcaaccgttacttcggtccctcagatgaagaggat
tcggatgacgagagcaaggacggagaggatgaggctaagaaggacgaagacaaggcctct
agccaggatccttctgcgcagagtcaggacgccaatggtgccaaggacaaggacgcaaac
tcgaagggcacactgacgccttctggcaagcagaaggaagccgatgctgcccgaaagggc
aagtcactgaagcgtcctggctcgccgaacctatcggaatctagtgaaacagagtcgacg
ctgaggaagaagaagctcaagaagaacggaagctctgtccaggtaagccgctcagggaca
cctctgccatcgggccacaaacacaaggttggaatgagctcgatgagcgacggcgaagcc
accggtggagagatgtccgatggccagcagaggaagaagaagatcaaacttcttggtacg
ggcgccaggagcacgcccactggctcgcgtgctggcagcccagcccctgcaggcgcagca
ggcagtacgttaagacctcttgaagaaagtatggaccaagctgacaagacaacgcaggtg
catcgccgacgagcccgaatccgcgtgccggctcaccctcccgatccgggcccattgaac
cctgggaggtcttcgcagcgctgccgccgcagggcatatcgtcaaaagaactcaacagac
gcttcaacgaacgcattggtgatggaccaggccagacatccaaagctggatggatcaaca
tcgtga
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integrated database retrieval system
