Verticillium alfalfae: VDBG_08433
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Entry
VDBG_08433 CDS
T02227
Name
(RefSeq) polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
val
Verticillium alfalfae
Pathway
val00040
Pentose and glucuronate interconversions
val01100
Metabolic pathways
Module
val_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
val00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VDBG_08433
Enzymes [BR:
val01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
VDBG_08433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
9529441
NCBI-ProteinID:
XP_003001388
UniProt:
C9SU12
LinkDB
All DBs
AA seq
375 aa
AA seq
DB search
MLVSVSALSFAWLAAAVQGAVCAAPAKASIVRPNIKAWPLNPGNLHLNSPARSADKVCYV
KPSCVGKDDAAAILKAFQQCNNGGTVVLDRNYTIASPLDLTFLNAIDVAITGTINFSDNM
TSWADHMSKYAYQDPLHVALRRSNIVVSDLDLRVKSVSKNIAKNTDGWDTYRSDSIVIQN
SVINNGDDCVSFKPNSTNIVVQGLQCNGSHGISVGSLGQYIDEFDIVENVYVYNISMANA
SDGARIKVWPGMYTPFQPTLSGGGGSGYVKNITYDGLFNTNNDWAIELTQCYGQKNLTLC
NQYPSNMIIQDVVFKNMWGTTSKSHDPNVGTLVCSAPGLCKNIRAQNITVTPPSGKPAKF
ICTNLDNSLLDITCS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtctcagtcagtgccttgtcattcgcatggctggcggcagctgttcaaggcgcc
gtttgtgcagcaccagccaaggcctcaattgtgcgccccaacatcaaggcttggccactc
aatcccggcaatcttcacttgaactcccccgctcgttcagccgacaaagtttgctatgtc
aagcccagttgcgttggcaaggacgacgccgccgccatcctcaaggctttccagcagtgc
aacaatggaggaacggtcgttttggaccgcaactacaccatcgcatcaccactagacttg
acgttcctgaatgccattgatgttgctatcacaggcaccatcaatttcagtgacaacatg
acgagctgggcggatcacatgtccaaatacgcctaccaggatcccttgcatgtggcgctt
cggcgctccaacatcgttgtgagcgacctcgatctgagggtcaagagcgttagcaagaac
atcgctaagaacactgatggctgggatacctaccgttcagattccatcgtgattcagaac
tcggtcattaacaacggtgatgattgcgtttcattcaagcccaacagcaccaacattgtg
gttcaaggcctccagtgcaacggctctcacggaatttccgttggttctctgggccagtac
attgacgaatttgacatcgtggagaacgtctatgtttacaacatttcgatggccaacgcc
tcagatggagcccgtatcaaggtctggccggggatgtacacgcctttccagcccactttg
tcaggtggtggcggctcaggctacgtcaagaatattacctatgacggcctcttcaacacc
aataacgactgggcaattgaactcacccaatgctatggccagaagaacctgaccctctgc
aatcaatatccctcgaacatgatcatccaagacgttgtcttcaagaacatgtggggcacg
acatccaagtcccatgaccctaatgtcggcacgcttgtctgcagcgcaccagggctctgc
aaaaacatccgagcccaaaatattaccgtcacacccccgagcggtaaaccggccaaattc
atttgcaccaacctagacaactcactgcttgacatcacctgcagctaa
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