Verticillium alfalfae: VDBG_08564
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Entry
VDBG_08564 CDS
T02227
Name
(RefSeq) pectate lyase C
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
val
Verticillium alfalfae
Pathway
val00040
Pentose and glucuronate interconversions
val01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
val00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VDBG_08564
Enzymes [BR:
val01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
VDBG_08564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-GeneID:
9529573
NCBI-ProteinID:
XP_003001519
UniProt:
C9SUE3
LinkDB
All DBs
AA seq
229 aa
AA seq
DB search
MKVSSVYLSLLSSLAAIPSVYACNGYEGGLPSHTDHHSNSQVIEVPAGEVYDGKWAKYDR
GSGACNEQNEGDWRDAVFYLRRGATLKNVIIGKDQAEGVHCDGPCTLEFVWFEDVCEDGI
SVKNDRPGDETWIIGGGAFKAQDKIIINFYAEDYGKVYRSCGNCSSQCKRNVYVEGVTAH
NGGEIVGINEAFGDTATLRNVCTDAKEACWIYDGCAGGCSPQKVRPCSG
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtatcatctgtttatttaagccttctctcttcgcttgcagctattccaagcgtc
tatgcctgtaacggctacgaaggaggcctcccctcccacaccgaccaccactccaattcg
caggtcatcgaggtcccggctggtgaggtctatgacgggaagtgggctaaatatgaccgg
ggatctggtgcctgcaatgaacagaatgagggagactggcgtgatgccgtcttctacctt
cgccgtggcgctactttgaagaacgtcatcataggcaaggaccaagctgagggtgtccac
tgtgacggtccttgcacccttgagtttgtctggtttgaagatgtttgcgaagatggtatc
tcggtaaagaatgacagacctggcgacgagacctggatcattggcggcggtgcctttaag
gctcaggataagatcattatcaatttctacgccgaagactatgggaaggtctatcgctcg
tgcgggaactgtagcagtcagtgcaaacgcaatgtgtacgtcgaaggtgtgacagcgcac
aatggtggcgagattgttggcatcaacgaggcattcggtgacactgccacgttgaggaat
gtctgcacagatgcgaaagaggcctgctggatctatgatggttgtgcaggtggctgctcc
cctcagaaagttcgtccttgctctggctga
DBGET
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