Verticillium alfalfae: VDBG_08897
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Entry
VDBG_08897 CDS
T02227
Name
(RefSeq) chromosome segregation protein sudA
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
val
Verticillium alfalfae
Pathway
val04111
Cell cycle - yeast
val04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
val00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
VDBG_08897
04113 Meiosis - yeast
VDBG_08897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_08897
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
val00535
]
VDBG_08897
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
VDBG_08897
Meiosis-specific proteins
Cohesin complex and associated proteins
VDBG_08897
Proteoglycans [BR:
val00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
VDBG_08897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9534493
NCBI-ProteinID:
XP_003001101
UniProt:
C9SVH2
LinkDB
All DBs
AA seq
1081 aa
AA seq
DB search
MYIKQIIIQGFKSYKDQTVIEPFSPGTNVIVGRNGSGKSNFFAAIRFVLSDNYNQMSREE
RQGLLHEGSGSAVMSAYVEIIFDNSDDRFPTGGKELILRRTIGSKKDEYSLDRKVVTKND
VINLLEAAGFSRSNPYYIVPQGRVSALTNMKESDRLNLMKEVAGTQVYEARRAESLKIMN
ETNNKREKIDELLGYIKERLAELEEEKEELRGFQDKDRDRRCLEYALYYQEQQAFQSQLE
RIENMRQNGLESTEQIRNELKDAEKTIAKLDAEITKLTREMDLLKIDRRQLDEERRKTAK
DKAVSELKVKNLFDGQSAAAQAQQQHDAELKAVRKEMADSKHELERITPVYDERRKKENE
IRLQMDTAEAARTRLYNKQTRSSQFKNKAARDKWLRDEIEDLRTNIMSQKANKLTTAEDV
ARLLSRDEEKLRHMTETALHEKHDAENRLGHSMDGATKRGLATIRRLKREQDVPGAYGTL
AELFEVNEAYRLAAEQIAGNSLFHYVVQDSRTSEFIIEQLNRQKGGRVTFMPLDQLRPRQ
VNLPRSQDAVPLLSKIRYDPKYEKAFQQVFGKVVVCRTLAIATQYARSHGVDAITPEGDQ
ASKRGAMTGGYIEPGRSRLEAVHALNQTRDSHEHLQSQLEELGHRIEQKGQQITQAMGEL
QKAEQKLRHLQGGFDPLRNQLSSKHAYLEREKAHLEAAIKRREKVEKNMKDFTETLAAHE
AELSSEFKKALSPAEERQLSELEKQVDQLQKEWNETSRQRGEVERRKQILEANISENLEQ
RLNQLISQEIENTVSGPSGNLKEAQRELKRLQKAADEVETKLQETETQIEQLSGKVARRE
VSKAENEQHLQEISVKEAKQRTLIEKSQSKKAVYSAQAADAAKAIRDLGVLPDDFSKYEN
LDSKQIDSRLKRVRNALKKYQHVNKKAFEQYNSFTSQQDQLLKRRSELDASQRSIKELIE
HLDERKDEAIERTFKQVSKEFATIFEKLVPAGHGRLVIQRRTDKRQIDPESRDDYRTAVA
ALLQSISDEAGTQFICTTFRPEIVLVADKCYGVTFSNKASSIDVYSSEEALNFVDGEAKG
R
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcagatcatcattcaaggcttcaagagctataaggaccaaacagtcatt
gagcccttctcccccggcaccaacgtcattgtcggccgcaatggctccggcaaaagcaac
ttcttcgcggccatccggttcgttctcagcgacaactacaatcagatgagccgcgaggag
cgccagggcctgttgcacgagggctccggctctgccgtcatgtcggcctacgtcgagatc
atctttgacaactcggacgaccgcttcccgaccggtggcaaggagctcatcctgcgacgc
accattggctcgaagaaggacgagtactcgctcgaccgcaaggtcgtcaccaagaacgat
gtcatcaacctactcgaggctgccggcttctcgaggtccaacccctactacattgttccg
cagggtcgcgtcagcgccttgaccaacatgaaggaatccgacaggctaaacctcatgaag
gaggttgccggtacgcaagtgtacgaggcccgtcgcgccgagtcgctgaagattatgaat
gagacgaacaacaagagggaaaagattgacgagctgctcggctacatcaaggagcgactc
gccgagctcgaggaggagaaggaagagctacgggggttccaggacaaagatcgggaccgc
aggtgtctcgaatacgccctgtactaccaggaacaacaggccttccagagccagctcgag
cgcatcgagaatatgcgccaaaatggcctcgagagcacagaacagatccgcaacgaactc
aaagatgccgaaaagaccatcgccaagctcgacgctgagatcaccaagttgacgcgcgag
atggaccttctcaagatcgatcggcgccaactggacgaggagcgtcgcaagacggccaag
gacaaggccgtgtccgagctcaaggtgaagaacctgttcgacgggcagtcagcggcagcg
caggcgcagcagcaacacgacgccgagctcaaggccgtgcgcaaggaaatggctgacagc
aaacacgagctcgaaaggatcacgcctgtttatgatgaacggagaaagaaggagaacgag
attcgactgcagatggacactgctgaggccgctcgcactcgcctctacaacaagcagact
cgcagctctcagtttaagaacaaggcggcgagggacaagtggttgagagacgaaattgag
gacttgcgcaccaatatcatgtcacaaaaggcaaacaagttgaccaccgccgaggatgtc
gctcgactgctgtctcgcgatgaggagaagctcagacacatgactgaaacggcattgcac
gagaagcacgatgccgagaacaggctgggccactcgatggatggcgcgacaaaacgtggt
ctcgcgacaattcgccgcctcaaacgtgagcaggacgttcccggtgcatacggtactttg
gcggagctgttcgaggtgaacgaggcctaccgcctggctgccgagcagatcgctggaaac
agtctgttccactatgtggtgcaagactcgcggacgtccgagtttatcattgaacagctc
aacaggcaaaaaggtggtcgtgttaccttcatgccgctcgaccaactgaggccacgccaa
gtcaatcttcccaggtcacaggacgccgtgcctctgctcagcaagatcagatacgacccc
aaatacgagaaggccttccagcaagtcttcggcaaggttgtcgtgtgccgcaccctggct
atcgcgacccagtacgcgaggagtcacggtgtcgatgccatcactccagagggtgatcag
gcgagcaagaggggtgccatgactggtggctacatagagcctggaaggtcgcgtctggaa
gcggttcatgcgctgaaccagacgcgagactcgcacgagcatctgcagtcacagctcgag
gagcttggccaccggattgagcagaaagggcaacagatcacacaggccatgggcgagctt
cagaaggccgagcaaaagctccgccatctccagggcgggtttgacccgctacgaaatcag
ctcagcagcaagcacgcttaccttgagcgggagaaggcgcatctcgaggccgccatcaaa
cgccgcgagaaggtggagaagaacatgaaagatttcacagagactctggctgctcacgaa
gccgaactctcgagcgaattcaagaaggcactctcccccgccgaggagcgccagctgagt
gagctggagaaacaggtcgaccaactccaaaaagagtggaatgagacgagtcggcaaagg
ggcgaggtcgagcgccgcaagcaaattctcgaggccaacatcagcgagaaccttgaacag
cggctgaaccaactcatcagccaggagatcgagaacacggtgtctgggccatcaggcaac
ctgaaagaggcgcagcgtgaactcaagaggctccagaaggccgcggacgaggtggaaacc
aagctccaggagaccgagactcagatcgagcagctgagcggcaaggttgctcgccgtgaa
gtcagcaaggcggagaacgagcaacatcttcaagaaatatctgtcaaggaggccaaacaa
cgaaccctcatcgagaagagccagtcaaagaaggcagtctacagtgctcaggcagcggat
gccgcgaaggccatccgtgacctcggcgttttgccggacgacttcagcaagtatgaaaac
ttggactcgaaacagattgattcgaggctcaagcgagttcgcaacgccctcaagaagtac
cagcacgtcaacaagaaggccttcgaacagtacaacagcttcacctcgcagcaggatcag
ctcttgaagcgacgctccgagcttgatgcttcgcagcgctccatcaaggaactcattgag
catctcgacgagcgcaaggacgaagccattgaacgcacgttcaaacaagtgtcgaaggag
tttgccaccatctttgagaagctcgtgcctgcgggtcacggccgcctcgttatccagcga
cgcaccgacaagcgacagattgacccggagagtcgggatgactaccgaactgctgtcgcg
gccctcctgcagagtatctccgacgaggccggcacgcagttcatctgcaccaccttccgt
ccggagattgtccttgtcgcggacaagtgctatggcgtcacatttagcaacaaggcgtcc
agcatcgacgtctactcttcggaagaggcgttgaactttgtggacggcgaggccaagggg
cggtag
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integrated database retrieval system
