Verticillium alfalfae: VDBG_08898
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Entry
VDBG_08898 CDS
T02227
Name
(RefSeq) TATA-binding protein-associated factor MOT1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_08898
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
VDBG_08898
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_2
TOR1L1_N
Vac14_Fab1_bd
TPR_Trm732_C
HEAT_EF3_N
ResIII
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
9534494
NCBI-ProteinID:
XP_003001102
UniProt:
C9SVH3
LinkDB
All DBs
AA seq
1876 aa
AA seq
DB search
MASRILETGSTRLIRDTAVSQLADWQKQHPDELFNLLSRVVPYLRHKDWETRSTAAKAIG
KIVENAPFYDPNEDEDDVPPPAPKDDENGAVKKEEEQDSSFAEDELFKLDSLNLDNILNF
GRELVRGGSVEYNLAALDPQSRLAHQKKTLNGRLGLLGRRFEDEEMPIIIEKDPSPSTPH
DHSNGNGLSRSDSNAAGQGQSTEESGLSSRQLNVLKRKRKREAQKAAKGGFGDLSIRRTA
TAGSEGLADDTPMPEAESKKSDYFSLERPADVDEDTKVVSEFKGPVLPIKSELEAEDTME
GTEWPYDRLCDFLKIDIFDPTWETRHGAAMGLREVIRVHGAGAGRMRAKSRQENDKLNKA
WLDDLACRLASVLMLDRFTDYSSDMSVAPIRESIGQTMGAVLRHVPPECVHDIYKVLFRM
VMQTDLSVGKVWAVCHGGMVGLRYVVAVRKDLLLEDGEMIDGVISAVMKGLQDQDDDVRS
VSAATLLPMAQEFVTMRPAAIDGLINIVWGSLQDLGDDLSASTGKIMDLLATLCSFPEVL
QAMQTSADTDEERTFNVLVPRLYPFLRHTITSVRLAVLKALMTFIGLEKQRSSGWLGEKL
LRLIFQNVLVERDRETLKMSLEVWSSLITSLAQNPTELADAASVEPMMQLALHPIGVSRN
PIPMNATLFQKPSGGTYTNAAMPVAPVRKAASPDGERASKRRRKSTKVDDAPVATHTHDV
DGHMMQGDVDLVGMDTLIRSRMSAAKAIGLLMAHIPVDRLVEYEQHILPALASPFSSTEL
TACVVIEEYAKNCAGEVSPRFTKPVQSIIETERPSHYRDLVSYMHRVRSQCSQLLNMFRD
HGKVSSSKLPTLAVVVQGEAEAGPGAFSVAVAEKVVNEDFDKLKKAMSPGQRLVASQMLA
ESRDVTTTAITDAKSAKDARDVRVKAAAACALVAIKALPKKPSPLIKGVMDSIKTEENHE
LQSRSANTIARLIQLFTEMGRKGPAEKVVSNLVKFSCVEVAETPEFPVHAAKTNCILSMQ
KEEDRVDHPDAAKWAKEAKAARITRRGAKEALEILSRNYGADLLTTVPVLRVFMEEPLVK
AFSGDLPAEAKNAEETFGQEIVDAMSLIRTLMPTMDKAMHPFVMDMVPLVIKALHSELSV
FRYMAAKCMATICSVMTVEGMTALVEKVLPSISNPIDLNFRQGAIEAIYHLIAVMGDAIL
PYTIFLIVPVLGRMSDSDNEIRLIATTSFATLVKLVPLEAGIPDPPGLSEELLKGRDRER
TFISQLLDPKKVEPFKIPVAIRAELRSYQQDGVNWLNFLNKYHLHGILCDDMGLGKTLQT
ICMVSSDHHQRAEEFAKTGAPDVRRLPSLIVCPPTLSGHWSQELRTYAPFLTVTAYVGPP
SERKALKDSLDKTDIVITSYDVCRNDVDILAQYNWNYIVLDEGHLIKNPKAKITMAVKRF
PSNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRFAKPIAASRFSKASSKEQE
AGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDMSDLQRKLFDDFTRKQGKKL
QEEAGKDDKEAKSHIFQALQYMRKLCNSPALVMKPGHNLYDDTQRLLNKQGTSLEDPAHA
PKLTALRDLLVDCGIGVEGAESNDPLYQPIKPHRALVFCQMKEMLDMVQNTVLKSMLPSV
SFLRLDGGVEANKRQAIVNKFNQDPSYDVLLLTTSVGGLGLNLTGADTVIFVEHDWNPQK
DLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKIDVASTVVNQQNAGLSTMDTD
QILDLFNMGDTGPGLISDKPNPMEGREEDMVDVETGDVITNKPGGKKAWMDDLDDLWDNR
QYEESFDLDGFLKTMQ
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaggatccttgagacgggaagcactcgtctcattcgagacacggccgtgagc
caacttgccgattggcagaaacagcacccagacgagctcttcaatcttctttctagggtt
gttccgtatcttcgtcacaaagactgggagaccaggtcaacagcagccaaggccatcggc
aagatcgttgaaaatgcccccttttacgatcccaatgaggacgaggacgatgttccacca
ccagcgcccaaggacgatgaaaatggcgcggtgaagaaggaggaggagcaggactcgtcc
ttcgccgaagacgagctgttcaagctggactcactgaacctcgataacattctgaacttt
ggccgcgaactggtcagaggcggctccgttgagtacaacctggcggcgttggacccccaa
tctcgacttgctcaccaaaaaaagacgttgaacggacggctcggactcctaggtcggaga
tttgaggacgaagagatgcccatcattattgagaaggatcccagtccatcgacaccacac
gaccacagcaatggtaacggcctgtcacggagcgacagcaatgctgctgggcagggccag
tccacagaggagtcaggcttgagctcacgacagctcaacgttctgaagcgcaagcggaag
cgagaagcccaaaaggctgccaagggtggttttggcgatttgtccatacggaggacggcc
actgcaggctctgaaggccttgcagacgatacgcccatgcccgaggctgaatcaaaaaag
agcgactacttcagcttagagcgacccgcagatgttgatgaggacaccaaggttgtcagc
gagttcaaaggccccgttctgcctatcaagtcggagctagaagccgaggacaccatggaa
ggcacagaatggccctacgacaggttgtgtgactttctcaagattgacatattcgatcct
acctgggagacacgtcatggagcggccatgggccttcgcgaagtcattcgagtacatggc
gcaggtgcaggcaggatgcgggccaagtcgcgccaggagaacgacaaactcaacaaagca
tggctcgatgacctcgcttgcaggctggcctctgtgctgatgctcgaccgcttcacagat
tacagctccgacatgtctgttgccccaattcgggaatctatcggccagactatgggtgcc
gtgcttcgccacgttccgccagagtgtgtgcatgatatttacaaggtcttgttccgcatg
gtcatgcaaaccgacctaagcgtcggcaaggtctgggctgtttgccacggaggcatggtt
ggtctgagatatgtcgtcgcagtcaggaaagacttgctcctcgaggacggcgagatgatc
gacggcgtcatatctgctgttatgaagggccttcaggaccaagacgacgatgtgcgttcc
gtcagcgcagcaacactactacctatggcccaggaattcgtcaccatgaggcctgccgcc
atcgatggcctcatcaacattgtctggggcagcctccaggatctaggtgacgacctcagc
gccagcacaggcaagattatggatctccttgccacgctgtgcagcttccccgaggtgctg
caggcaatgcaaacatccgccgacacagatgaggaacggactttcaacgttcttgtcccc
agactctatcctttcctccgccacaccattacttcagttcgacttgctgttctgaaggct
ctgatgacctttattgggttggaaaagcagcgttccagtggatggctcggagagaagctt
ctgcgacttatcttccagaacgtattggtcgagagggatagagagactctcaagatgtcc
ctagaggtctggtcgtcactcattacatctctcgcccaaaatcctacagaacttgccgac
gccgcgtcagttgagcccatgatgcaactggctctacaccccattggcgtgtctcgcaat
ccaattcctatgaatgccacgctcttccagaaaccctcaggtggcacatatacaaatgcc
gccatgcccgtggccccagtcaggaaagcggcctcgccagacggagaacgggcatctaag
cgtcggcggaagtccaccaaggtcgatgatgctcctgttgccactcatactcacgatgtc
gacggccacatgatgcaaggcgatgtcgaccttgttggcatggataccttgatccggtcg
agaatgtcagctgcaaaggccataggcttactcatggcgcacattcctgtcgacaggctt
gtcgaatacgagcaacatattctacctgctcttgcttcgcccttctcgtcgacagagctc
actgcatgtgttgtcattgaggaatacgcaaagaactgtgccggcgaggtctcgccacgc
ttcaccaagccagtgcagagcattatcgaaacagaacgaccctcccactatagggatcta
gtcagctacatgcaccgcgtgcggtctcagtgctcacaactgcttaacatgtttagagac
catggcaaagtatcgagcagcaagctgcccaccctcgctgtcgtcgtacagggcgaggca
gaagccggacctggcgcgttctcggtcgctgtggccgagaaggtcgtcaacgaggacttc
gacaaactcaagaaggctatgtcacccggccagcgtcttgttgcaagtcagatgctggct
gagtcccgagatgttacaaccacagccattacggatgcaaagtcagcaaaagacgccagg
gatgtgcgtgtcaaggctgccgctgcctgcgcacttgtcgccatcaaggcgctgcccaag
aaacccagccccctcatcaagggcgtcatggacagcatcaagactgaggaaaaccacgag
cttcaaagccgttctgccaacacaattgcaagactcattcagctcttcaccgagatggga
cgcaagggccctgctgagaaggtcgtatcaaatctcgtcaagttctcttgcgttgaggtt
gccgaaactccagagttccccgtacatgcagccaagacgaattgcatcttgtcaatgcag
aaggaggaagatagggttgaccatcctgacgctgcgaaatgggccaaggaagccaaggca
gcgcgcatcacgcggcgcggcgcaaaggaggctctcgagatcctgtcaaggaattacggc
gccgatctgctcactaccgtgcctgtcttgagggtgtttatggaggagccccttgtcaag
gccttctcgggcgatctgcccgccgaagcaaagaatgctgaggagacttttggccaggag
attgtggacgccatgtccctcatccgaaccctcatgccaactatggacaaggcgatgcat
ccctttgtcatggacatggtacccctggtcatcaaggcgctgcattccgagctttccgtc
ttccgctacatggcagcgaagtgtatggccacgatctgcagcgttatgacggtcgagggc
atgaccgcgcttgtggaaaaggtcttgccctcgatcagcaaccctatcgacctcaacttc
agacaaggcgcgattgaagcgatctaccacttgattgctgtcatgggcgatgctattctg
ccatataccatcttcctcatcgtgcccgtcctgggccgcatgagtgattcggacaatgag
atccgtctcatcgcaaccacatcgtttgctacactcgtgaagcttgtgcctctcgaggct
ggtattccagacccgccggggctgtcggaggagctcctcaaaggacgagatcgagagcgt
acgttcatctcccaacttctcgatcccaagaaggtggaaccgttcaagatcccagttgcc
atcagagctgagctgcgctcttaccagcaagatggtgtcaactggctcaacttcttgaac
aagtatcatctgcacggtattctctgtgacgacatgggtctcggcaaaacgcttcaaacc
atctgcatggtttccagcgaccatcaccagcgcgctgaagagtttgcgaagactggcgcc
cccgatgttcggcgactcccttcgctcatcgtttgcccgcctaccctctcgggtcattgg
tcgcaggagctgcggacctacgctccctttctgaccgtgacagcctacgtcggcccgcct
agcgagagaaaggctctgaaggactcgctcgacaagacggacattgtgatcaccagctac
gatgtgtgtcgcaacgatgtcgacattttggcgcagtacaactggaactacatcgttctt
gatgaaggtcacctcatcaagaatccaaaggccaagatcaccatggcagtcaagcggttc
cctagcaaccaccgattgattctgacgggaacaccaattcaaaacaacgttctcgagctt
tggtccctgttcgacttcttgatgccaggtttcttgggagcggaaaaggtcttccttgac
cggttcgccaaacccatcgccgcgagtcgcttcagtaaagcttcatcgaaagaacaggaa
gcgggtgccctggccattgaggccctgcacaagcaggtgttgcccttcctattgcgacgt
cttaaagaggaggtgctcaacgacctcccgcccaagattctgcaaaactactattgcgac
atgagcgatctgcagaggaaactctttgacgactttactcgaaagcaaggtaagaagctc
caagaagaagctggcaaggacgacaaagaagccaagtcacacatcttccaagctttgcaa
tacatgcgcaaactatgcaactcgccagctttggtaatgaagccaggtcacaacctctac
gacgacacgcagcgtctgctgaacaagcagggcaccagcctcgaggacccagctcatgca
ccgaagctgacggccctacgcgaccttcttgtggactgtggtattggcgtcgagggagcc
gagtcaaacgatcccttgtaccaacccatcaaaccgcatcgtgcactggtgttctgtcag
atgaaggaaatgttggacatggtccagaatacggttctcaagagcatgctgcccagcgtg
tccttcctccgactggatggtggcgtcgaggccaacaagcgacaggctattgtcaacaag
tttaaccaagacccttcgtacgacgtccttctcttgacgacgagcgtcggtggcctgggt
ctcaatctgacaggcgctgacactgtcatcttcgtggagcatgattggaaccctcagaag
gatttgcaggccatggatcgcgcccaccgaatcggtcagaagaaggtcgtcaacgtgtat
cgtctcatcacacgcggcacgcttgaggagaagattctgagtctgcaacggttcaagatt
gacgtggcgtcgacagtcgtcaaccagcagaacgcaggcctgtcgacaatggacacggat
cagattctcgatctgttcaacatgggtgacaccgggccaggtcttatcagcgacaagccg
aacccgatggaaggacgagaagaggacatggtggacgtcgagacgggtgatgtgatcacc
aataagccgggcggtaagaaggcctggatggacgatctggacgatctctgggacaaccgt
cagtacgaagagagcttcgacctcgacggcttcttgaagacgatgcagtag
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integrated database retrieval system
