Verticillium alfalfae: VDBG_09092
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Entry
VDBG_09092 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
val
Verticillium alfalfae
Pathway
val00040
Pentose and glucuronate interconversions
val01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
val00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VDBG_09092
Enzymes [BR:
val01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
VDBG_09092
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
CBM_1
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9528304
NCBI-ProteinID:
XP_003000597
UniProt:
C9SW17
LinkDB
All DBs
AA seq
383 aa
AA seq
DB search
MSQTLQNVSLVVQLGRTSLVGSQRLHSDHRLGRAQCGGTGWAGPTCCVSGSNCVAQGEWY
SQCTPSGGTSPSPPSAPPPTSGTSACVATADGFASLNGGTTGGAGGTIITVTNQSDLEKY
ASASGRHVIKVQGRITIVPFGKEVRVSSDKTIVGLGSTGEIYQGAFQCCVVISNTSAKRP
RRLCHPWGSQRHHSKPQDRKHADDYRERLRWDSICLLENGGDGLLDLRKDTTFFTVSNNI
FRNHDKAFGIGWTENIVARGTIHHNWFDRTNQRNPSADNLAQCHLYNNYVLGVTSYGHYA
RGSTNARVENVYFESCRNPLTKDSGAILNASGNIYQSYTGTVAANSGTAFQPRDYYSYTL
TATADVPSYVKANAGPRASVCPS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagacgttgcagaacgtcagtcttgtagtacagcttggtaggacttctcttgtg
ggaagtcagagactgcattctgatcatcgtcttggtagggcccaatgcggcggcactggc
tgggctggaccaacttgttgcgtcagcggcagcaattgtgttgcccaaggtgaatggtat
tcgcaatgcaccccatccgggggcacctcgccttctccgccatccgctccaccccccaca
tctgggacatcagcatgcgtggcaaccgctgacggctttgcctcactcaatggaggaacg
actggtggtgcgggcggaacaattatcactgtcactaaccaatccgaccttgagaaatat
gccagtgcttcgggccggcatgtcatcaaggttcaaggccgaatcaccattgtaccattt
ggtaaagaggttcgagtctcaagcgataaaaccattgtgggccttggatcaacgggcgag
atttaccaaggtgcgttccaatgttgtgtagtcatcagtaatacttcagctaaaagacca
aggcggctttgccatccatggggttcgcaacgtcatcattcgaaacctcaagatcggaaa
cacgccgatgactacagagaacgactacgatgggattcaatctgtttgctggagaatggc
ggcgatgggttgctcgatctgcgaaaagacacaacgttctttacagtgtccaacaacatc
ttccggaatcacgataaggcttttggtatcggttggacggaaaacattgttgcgcgcggc
accatccaccacaattggttcgaccgtacaaaccaacgcaacccaagcgccgacaacctt
gctcagtgtcatctctacaacaattatgtcttgggagtgacttcatatggtcactacgcc
cgtggatcgacgaatgctcgggtggagaatgtctactttgagagttgccgcaatcccttg
accaaggattcaggagcgattcttaatgcttcgggtaacatctatcagtcatacactgga
actgtggctgcaaactcaggcacagcgttccagccgcgcgactactacagctatactctc
acagcaacagccgatgtaccttcttatgtcaaggccaatgcaggacccagggcatcagtg
tgcccttcgtaa
DBGET
integrated database retrieval system
