Verticillium alfalfae: VDBG_09336
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Entry
VDBG_09336 CDS
T02227
Name
(RefSeq) transcription initiation factor IIE subunit alpha
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
val
Verticillium alfalfae
Pathway
val03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VDBG_09336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_09336
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
VDBG_09336
Prokaryotic type
Archaeal type
TFE
VDBG_09336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_6
wHTH-PRTase_assc
POR
Motif
Other DBs
NCBI-GeneID:
9528972
NCBI-ProteinID:
XP_003000141
UniProt:
C9SX36
LinkDB
All DBs
AA seq
411 aa
AA seq
DB search
MAKTLVRQVVRAFYDNNYVLVIDALIIHSALKDEDLRFMLGMNTKEVHRLCGKLREDRFI
TSYTRPEQSNNPEQKRPINKQYYFIDYRQAIDAIKWRVYTVDKEIQGTNIPVSERKEYFC
ERCKAEWTQMEVLDKASSAGFLCHNCEYPLTHDLERHSTGHQESTRLNEQFKFITEMLPR
IDDVVVPENTFDIAISAYKPLAPDTSQGPIGFVSALQPTSVKGLDNIGPKSLSVNISTSD
GPSEAEKAAEQARKDKIAHQNALPSWMSNSTVTGESYLTANSTSTPAVKTQALDPKEGIK
SSGEEQDDSEMAKMFAAIKAQQEADAARALAEEGSDDEEDDDEDDFEDVVATGNNSSGAT
PASAATPANKRSADSHEDSADDLPAKRVKLESPAQQEGDESEEDLEFEDVS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacgttggtcaggcaggtggttcgagccttctacgacaacaactatgtcctg
gtcattgacgccctaatcatccattcggcactcaaggacgaagacttgcgctttatgttg
ggaatgaacacaaaagaggtacacaggctttgcggaaagctgcgagaagatcgcttcatc
acgtcatatacgcgaccggagcagtcgaataacccggaacagaagcgaccaatcaacaaa
caatactacttcatcgattaccgacaggccatcgacgcgatcaagtggcgggtgtacacc
gtggacaaagagatacagggcacgaacattccggtaagcgagcgcaaggaatacttctgc
gagcgttgcaaagcggaatggacccaaatggaggtgctcgacaaagccagcagcgcaggg
ttcctctgtcacaactgcgagtaccccttgacacatgacttggaacggcactcgacggga
caccaagagtcaaccagattgaacgagcagttcaagttcatcacagagatgctgccgcgc
atcgatgatgtggtcgtaccagagaacacattcgacatagctatcagtgcctacaagccg
ctcgcaccggataccagccagggtcccatcggttttgtctcggccctccagcctacatcg
gtcaaaggactggacaacatcggaccaaagtctctatcagtcaatatatccacatccgac
ggaccgtcagaggcagagaaggccgcggagcaggccaggaaagataagattgcgcatcaa
aatgcgctaccttcatggatgtccaacagcaccgttacgggagaatcctatctcacggcg
aattctacatcgacccctgcggtgaaaacgcaagcacttgatccgaaagagggcatcaaa
agcagcggggaggaacaagatgactcggaaatggcaaagatgttcgcagctattaaggca
cagcaagaagcagatgctgcacgggcgctggcagaagaaggcagcgacgacgaggaagac
gatgacgaggacgatttcgaggatgttgtggcgacaggcaacaactccagcggggcaacg
ccagccagtgctgccacgcctgcgaataaaagaagcgcagattcccatgaagacagcgcc
gacgacttgccagcaaaacgagtcaagcttgagtcgccggctcagcaggaaggtgacgag
agcgaagaagaccttgaatttgaagatgtttcatga
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integrated database retrieval system
