Verticillium alfalfae: VDBG_09352
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Entry
VDBG_09352 CDS
T02227
Name
(RefSeq) SNARE domain-containing protein
KO
K08489
syntaxin 16
Organism
val
Verticillium alfalfae
Pathway
val04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
VDBG_09352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_09352
Membrane trafficking [BR:
val04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
VDBG_09352
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
MCPsignal
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
9528988
NCBI-ProteinID:
XP_003000157
UniProt:
C9SX52
LinkDB
All DBs
AA seq
360 aa
AA seq
DB search
MWRDRTNLYISYRQSYAHHPTKRTKYTSSGPGGGNAFSDNYATASGSEDTRGLLSAGAFE
DDGDAVIEMDLLPPRWADISDEITDLLADIARRSQALERLHQKHVLPGFDDEDAKKAEER
EIEHLTQKITKGFHDCHGCIQRIERMVKEAKHAGAISQGEETMAKNIQISLASRVQDASA
LFRKKQSAYLKKLRGMSSLGGFTPVGERSSTPQPGPSSYVDPDITESDADRSFSQSTLQV
TQQRLLQNNDAAIIQREREIEDIAQGIIELADIFRDLQNMVIDQGTMLDRIDYNVENMAT
DVKAADKELVVAAGYQKKTTKRKIILLLLLIVVGMFILLLIKPKRGNDRGGEGDHRDEQV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgggaccgcacgaatctatacatctcctatcggcagtcctatgcgcatcaccca
acaaaacgaacaaagtacaccagtagcgggcccggcggaggcaatgccttcagcgacaac
tatgccaccgcctcgggctctgaggatactcgtggcctgctctccgcaggtgctttcgag
gacgatggcgacgccgtgattgagatggatcttctgcccccgcgctgggccgacatctcc
gacgagattacagacttgctggcagatattgcgcgaaggagccaggcactcgagcgcctg
catcagaagcatgtgctgccaggattcgatgatgaggatgcgaaaaaggctgaggagcgc
gagattgagcatctcacgcaaaagatcacaaaagggttccatgactgccacggctgtatc
cagcgcattgaacgcatggtcaaggaggcaaaacatgctggagccatcagtcaaggggaa
gaaaccatggcgaagaacattcagatatctttagcgtcaagagtgcaagacgctagcgcc
ttattcaggaagaagcaaagtgcatatctcaagaaattgcgcggtatgagtagtttggga
ggcttcaccccggtgggtgaaaggtcgtccacacctcaaccagggccgagttcctacgta
gaccccgacattaccgagtccgatgcagataggtcattctcacagtcgacattgcaagta
acgcagcagagactgttgcagaataatgatgctgccatcattcagcgagaacgcgagatt
gaagacattgcacaaggcatcatcgagctggcggatattttccgcgatctacagaatatg
gtcattgaccagggcaccatgttggatcgcatcgactataatgtcgagaatatggcgaca
gatgtcaaagcggccgacaaggagcttgttgtcgcggctgggtatcagaagaagacgacc
aagagaaagattatactgctcttgttgctcatcgtcgtgggcatgttcatcttattgttg
atcaagccgaagaggggaaacgacaggggtggtgagggagaccaccgagatgaacaggta
tga
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