Verticillium alfalfae: VDBG_09410
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Entry
VDBG_09410 CDS
T02227
Name
(RefSeq) vacuolar protein sorting-associated protein vps5
KO
K17917
sorting nexin-1/2
Organism
val
Verticillium alfalfae
Pathway
val04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
val00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
VDBG_09410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_09410
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
val04990
]
VDBG_09410
Membrane trafficking [BR:
val04131
]
Endocytosis
Macropinocytosis
Sorting nexins
VDBG_09410
Domain-containing proteins not elsewhere classified [BR:
val04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
VDBG_09410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps5
PX
BAR_3
BAR_3_WASP_bdg
BAR_2
DUF713
DUF745
Motif
Other DBs
NCBI-GeneID:
9527915
NCBI-ProteinID:
XP_003000215
UniProt:
C9SXB0
LinkDB
All DBs
AA seq
582 aa
AA seq
DB search
MDPLEESPWGESAPSQTSQPETSQSQDDAPKPSAPSTSSTRPSRAAPRRMVAQPTRLEAV
DDDPLGPLGPLGGPATPGTPDLGQDAPPVPPQKEEMVIRTTMPPSQTRRAGPADPHRVDD
TDDDYNRSSGPRAPPPVQAAHPSAVRTTTNPSVSVEQASRPTFHISVGDPHKVGDFTSSH
VQYAVRTEAYKEPEFEVKRRYRDFLWLYNTLHGNNPGIVVPPPPEKQAVGRFETNFVESR
RAALEKMLNKIAAHPTLQLDGDLKLFLESESFNVDIKHKERREPIPTESKGVLGSLGISV
GGGSKFVEQDDWFHDRKVYLDALENQLRALLKAMETMVGQRKMMAEAAGDFSASLHALST
VELSPSLSGPLDALSELQLTIRDVYDRQAQQDVLTFGIILEEYIRLIGSVKQAFAQRQKA
FYSWHTAESEMQKKKTTQDKLLRQGKSQQDRLNQMGAEVADAERKCHHARMLFEDMGRLM
RAELDRFEKEKVEDFKSGVETFLESAVEAQKELIEKWETFLMQLDADDDETVFYRPPVTE
GNKPAGADQDGAAAHLGHVLLGSAVRFESLGSFAGVAQPAYR
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatcctctcgaagaatccccttggggcgaatcggcgccttcgcaaacctcgcaaccc
gaaacctcccaatcgcaggatgatgcacccaagccctccgctccgagcacctcttcgacc
cgcccctcgcgcgctgctcctcgccgcatggtagcccagccaacccgcctcgaagccgtc
gatgacgaccctctcggtccattgggcccccttggcggccctgctactcccggcactccc
gacctcggccaggatgcgcctcccgtcccgccccagaaggaggagatggtgattcgcacc
accatgccgccctctcagactcgccgcgctgggcccgccgacccccatcgtgtcgacgat
acggatgacgattacaaccgctcaagtggccctcgcgcgccgccccctgttcaggctgcc
catcccagcgccgttcggacgaccaccaaccccagcgtgagcgtcgaacaggcgagcagg
ccgaccttccacatttccgtcggcgatccccacaaggtcggcgactttacaagttcacac
gtgcagtatgccgtgcggactgaggcgtacaaggagcccgagtttgaggtgaagcgacgg
taccgcgatttcctgtggctgtataacacactgcacgggaataaccccggcattgtcgtg
ccgccgcccccagagaagcaggctgtcggtcgcttcgagactaacttcgtcgagagccgc
cgcgccgcgttggagaagatgctcaacaagatcgcggcgcaccctacgttgcagctcgac
ggcgacctgaagctgttcctcgagagcgagtccttcaacgtcgacatcaagcacaaggag
cggagggagcccatcccgacagaaagcaagggtgtcttgggcagcctgggcatcagcgtc
ggcggcggcagcaagtttgtcgagcaggatgactggttccacgatcgcaaggtttacctc
gatgcgctggagaaccagctccgcgccctactcaaagccatggagaccatggtcggccag
aggaagatgatggccgaggcggccggcgacttctccgcctccctgcacgccctctcgacc
gtcgagctctcgccctcgctctctggccctctcgacgccctctcagagctgcagcttacg
attcgcgatgtgtacgatcgtcaggcccagcaggatgtgctcacgtttggcattattctt
gaggagtacatccgactcatcggatctgttaaacaggcctttgcgcagcggcaaaaggcc
ttctactcatggcacactgccgagtcagagatgcagaagaagaagaccacgcaggacaag
ctcctaaggcagggcaagagccagcaggaccgtctcaaccagatgggcgccgaggtcgca
gacgctgagcgcaaatgccaccatgcgcgcatgctgttcgaggacatgggccgactgatg
cgggcggaactggaccgcttcgagaaggagaaggtcgaggacttcaagagcggcgtggag
acgttcctggagagcgccgtcgaggcgcagaaggagttgatcgaaaagtgggagacgttc
ctcatgcagcttgacgccgacgacgacgagacggtcttctaccgcccgcctgtgacagaa
ggcaacaagccggccggtgccgaccaagatggcgccgcggcgcacctcggtcatgtcctt
ctggggtccgccgtgcgattcgagtcgctgggcagctttgccggtgtcgcgcaaccggcg
tatcgttag
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