KEGG   Verticillium alfalfae: VDBG_09415
Entry
VDBG_09415        CDS       T02227                                 
Name
(RefSeq) branchpoint-bridging protein
  KO
K13095  splicing factor 1
Organism
val  Verticillium alfalfae
Pathway
val03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VDBG_09415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:val03041]
    VDBG_09415
Spliceosome [BR:val03041]
 Complex A
  Other components
   Complex A specific factors
    VDBG_09415
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP zf-CCHC KH_1 zf-CCHC_6 zf-CCHC_4 zf-CCHC_3 zf-CCHC_2 CCDC93_CC KH_NusA_1st
Other DBs
NCBI-GeneID: 9527920
NCBI-ProteinID: XP_003000220
UniProt: C9SXB5
LinkDB
AA seq 592 aa
MSWRNQGITGSNNIPLGKRRFGDDEEDGGDGGGRDRAPAVGGAELKRGRSPEPRTDADGP
RRRKKRNRWGDASENKAAGLMGLPTAIMANMTSEQLEAYTLHLRIEEISQKLRIDDVVPA
DGDRSPSPAPQYDNHGRRINTREYRYRKKLEDERHKLIEKAMKTIPNYHPPQDYRRPTKT
QEKVYVPVNDYPEINFIGLLIGPRGNTLKKMENESGAKIAIRGKGSVKEGKGRSDAAHSS
NQEEDLHCLIMADTEEKVNKAKKLIHNVIETAASIPEGQNELKRNQLRELAALNGTLRDD
ENQACQNCGQIGHRKYDCPEKQNYTASIICRVCGNAGHMARDCPDRQRGASWRNDGAGPR
PAGRIDGGDAVDREYECTDVAQQLMQELGGGPADGAPPARIEAGPGSYNNDQRGGDVKPW
QRGPTGGPAPWRSRNESNHDGGSGGGGGGGGGGGGGAAPWARDRHRDRDDHRGHGGGGGG
GGDYYGGQGGNNYGSQGGQNAAPWQQAPGTQGGYGGYGGYSGGYGAPPGMSAPPGIPPPP
GAPGLGAPPNLTGNLNALIQQYAGGAPPPPPPSDNAPPPPPSDQPPPPPPGA
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgtcgtggagaaaccagggtatcaccggttcgaacaatatcccactgggaaagcgtcgc
tttggcgatgacgaagaagacggcggcgacgggggtggtcgcgaccgcgcccctgcagtt
ggtggtgccgaactgaagcgcggtcgtagtcctgaacctcgcaccgacgccgatggcccg
cggcgccgcaagaagcgcaaccgatggggcgacgcctccgagaataaggccgctggcctt
atgggccttccgacggccatcatggccaacatgaccagcgaacagctcgaggcgtacacc
ctgcatcttcgaatcgaagaaattagtcaaaagcttcgcatcgacgatgtcgtccctgcc
gacggcgaccgatcgccctctcctgcaccccagtacgacaaccatggtcgccgtatcaac
actcgcgagtaccgctaccggaagaagcttgaggatgagcgccacaaactcatcgagaag
gccatgaagacgatccccaactaccacccgccccaggattaccgcaggccgaccaagacc
caggagaaggtctacgtgcccgtcaacgattacccagagattaacttcattggcttactt
atcggccctcgtggcaatactttgaagaagatggagaacgaatccggcgccaagattgcc
attcgtggcaagggctccgtcaaggagggcaagggtcgttccgacgccgcccattccagt
aaccaggaggaggacctccactgcctcatcatggccgacacggaggagaaggtcaacaag
gccaaaaagctgattcacaatgtcattgagacggctgcttccattcccgaaggccagaac
gagctcaagcgtaaccagctccgtgagcttgctgctctgaacggtacgctccgtgacgac
gagaaccaggcttgccagaactgtggtcaaatcggacatcgcaagtacgactgccccgag
aagcagaactacaccgccagcatcatctgcagagtctgtggcaacgctggccatatggcc
agggattgtcccgaccgtcagcgcggggccagttggcgcaacgacggcgccggcccacgt
cctgccggtcgcatcgacggtggcgatgccgtcgatcgcgagtacgagtgtactgacgta
gcccagcaactcatgcaagagcttggcggcggccccgccgatggcgctcctcctgctcgc
atcgaagccggacctggctcgtataacaacgaccagagaggtggtgatgtcaagccctgg
cagcgcggcccaacaggagggcctgccccatggcggtcacgcaacgagtcgaaccatgac
ggcggctccggcggcggtggtggtggtggtggtggtggaggcggcggtgctgctccctgg
gcgcgtgaccgtcaccgcgatcgcgatgatcatcgcggccatggtggcggcggcggcggc
ggcggcgactattacggcggtcaaggtggtaacaactacggcagtcaaggtggtcagaac
gccgcgccgtggcagcaggctcccggtacgcaaggcggctacggaggctacggcggttac
tctggtggctacggtgctcctcccggcatgagtgctcctcccggcatccccccgccacct
ggagctcctggccttggagctccgcctaacctcactggcaacctgaacgcactcatccag
cagtacgcaggcggtgctcctcctcccccgcccccctcggacaacgcacctcctccacct
cccagcgaccagccgcccccgccccctcctggcgcttga

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