Verticillium alfalfae: VDBG_09415
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Entry
VDBG_09415 CDS
T02227
Name
(RefSeq) branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
val
Verticillium alfalfae
Pathway
val03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VDBG_09415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
val03041
]
VDBG_09415
Spliceosome [BR:
val03041
]
Complex A
Other components
Complex A specific factors
VDBG_09415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
KH_1
zf-CCHC_6
zf-CCHC_4
zf-CCHC_3
zf-CCHC_2
CCDC93_CC
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
9527920
NCBI-ProteinID:
XP_003000220
UniProt:
C9SXB5
LinkDB
All DBs
AA seq
592 aa
AA seq
DB search
MSWRNQGITGSNNIPLGKRRFGDDEEDGGDGGGRDRAPAVGGAELKRGRSPEPRTDADGP
RRRKKRNRWGDASENKAAGLMGLPTAIMANMTSEQLEAYTLHLRIEEISQKLRIDDVVPA
DGDRSPSPAPQYDNHGRRINTREYRYRKKLEDERHKLIEKAMKTIPNYHPPQDYRRPTKT
QEKVYVPVNDYPEINFIGLLIGPRGNTLKKMENESGAKIAIRGKGSVKEGKGRSDAAHSS
NQEEDLHCLIMADTEEKVNKAKKLIHNVIETAASIPEGQNELKRNQLRELAALNGTLRDD
ENQACQNCGQIGHRKYDCPEKQNYTASIICRVCGNAGHMARDCPDRQRGASWRNDGAGPR
PAGRIDGGDAVDREYECTDVAQQLMQELGGGPADGAPPARIEAGPGSYNNDQRGGDVKPW
QRGPTGGPAPWRSRNESNHDGGSGGGGGGGGGGGGGAAPWARDRHRDRDDHRGHGGGGGG
GGDYYGGQGGNNYGSQGGQNAAPWQQAPGTQGGYGGYGGYSGGYGAPPGMSAPPGIPPPP
GAPGLGAPPNLTGNLNALIQQYAGGAPPPPPPSDNAPPPPPSDQPPPPPPGA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggagaaaccagggtatcaccggttcgaacaatatcccactgggaaagcgtcgc
tttggcgatgacgaagaagacggcggcgacgggggtggtcgcgaccgcgcccctgcagtt
ggtggtgccgaactgaagcgcggtcgtagtcctgaacctcgcaccgacgccgatggcccg
cggcgccgcaagaagcgcaaccgatggggcgacgcctccgagaataaggccgctggcctt
atgggccttccgacggccatcatggccaacatgaccagcgaacagctcgaggcgtacacc
ctgcatcttcgaatcgaagaaattagtcaaaagcttcgcatcgacgatgtcgtccctgcc
gacggcgaccgatcgccctctcctgcaccccagtacgacaaccatggtcgccgtatcaac
actcgcgagtaccgctaccggaagaagcttgaggatgagcgccacaaactcatcgagaag
gccatgaagacgatccccaactaccacccgccccaggattaccgcaggccgaccaagacc
caggagaaggtctacgtgcccgtcaacgattacccagagattaacttcattggcttactt
atcggccctcgtggcaatactttgaagaagatggagaacgaatccggcgccaagattgcc
attcgtggcaagggctccgtcaaggagggcaagggtcgttccgacgccgcccattccagt
aaccaggaggaggacctccactgcctcatcatggccgacacggaggagaaggtcaacaag
gccaaaaagctgattcacaatgtcattgagacggctgcttccattcccgaaggccagaac
gagctcaagcgtaaccagctccgtgagcttgctgctctgaacggtacgctccgtgacgac
gagaaccaggcttgccagaactgtggtcaaatcggacatcgcaagtacgactgccccgag
aagcagaactacaccgccagcatcatctgcagagtctgtggcaacgctggccatatggcc
agggattgtcccgaccgtcagcgcggggccagttggcgcaacgacggcgccggcccacgt
cctgccggtcgcatcgacggtggcgatgccgtcgatcgcgagtacgagtgtactgacgta
gcccagcaactcatgcaagagcttggcggcggccccgccgatggcgctcctcctgctcgc
atcgaagccggacctggctcgtataacaacgaccagagaggtggtgatgtcaagccctgg
cagcgcggcccaacaggagggcctgccccatggcggtcacgcaacgagtcgaaccatgac
ggcggctccggcggcggtggtggtggtggtggtggtggaggcggcggtgctgctccctgg
gcgcgtgaccgtcaccgcgatcgcgatgatcatcgcggccatggtggcggcggcggcggc
ggcggcgactattacggcggtcaaggtggtaacaactacggcagtcaaggtggtcagaac
gccgcgccgtggcagcaggctcccggtacgcaaggcggctacggaggctacggcggttac
tctggtggctacggtgctcctcccggcatgagtgctcctcccggcatccccccgccacct
ggagctcctggccttggagctccgcctaacctcactggcaacctgaacgcactcatccag
cagtacgcaggcggtgctcctcctcccccgcccccctcggacaacgcacctcctccacct
cccagcgaccagccgcccccgccccctcctggcgcttga
DBGET
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