KEGG   Verticillium alfalfae: VDBG_09681
Entry
VDBG_09681        CDS       T02227                                 
Name
(RefSeq) nucleolar essential protein
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
val  Verticillium alfalfae
Pathway
val03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    VDBG_09681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:val03009]
    VDBG_09681
Enzymes [BR:val01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     VDBG_09681
Ribosome biogenesis [BR:val03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    VDBG_09681
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 9531864
NCBI-ProteinID: XP_002999961
UniProt: C9SXQ6
LinkDB
AA seq 196 aa
MASKREEKYSLLNSDEHIGIMRKMNRDISDARPDITHQCLLTLLDSPINKAGKLQIYIHT
AKGVLIEVSPSVRIPRTFKRFAGLMVQLLHRLSIRSTNSQEKLLRVIQNPITDHLPPNCR
KVTLSFDAPLVKVRDYVDTLGPKESICVFVGAMAKGADTFADGLVDEKIAISNFSLSASV
ACSKFCHAAEDSWDVL
NT seq 591 nt   +upstreamnt  +downstreamnt
atggcatccaagcgcgaagaaaaatattctctcctcaacagcgatgaacatattggcatc
atgcgtaagatgaaccgggacattagtgacgcccggccagatatcacacaccagtgcctc
ttgactctgctggactcgccgatcaacaaggccgggaaactccagatctacattcacaca
gcaaagggggtactgattgaagtgtcgccttcggtccgtatccctcgaaccttcaagcgc
ttcgccggtctcatggttcaacttctgcaccgcctgtcgattcgctcgaccaactcacag
gagaaactcttgcgcgtcatccagaaccccatcactgatcatctcccgcctaattgccgc
aaggtcacgctcagtttcgacgcgcccctggtaaaagtgagagactacgttgacacgctc
ggtccgaaggagagcatctgcgtctttgttggcgccatggccaagggcgctgatacgttt
gctgacggtctcgtggacgagaagattgccataagcaacttcagcttgtctgccagtgtg
gcctgcagcaagttctgccacgccgccgaggactcgtgggatgttctctga

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