Verticillium alfalfae: VDBG_09721
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Entry
VDBG_09721 CDS
T02227
Name
(RefSeq) MSN5
KO
K14289
exportin-5
Organism
val
Verticillium alfalfae
Pathway
val03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VDBG_09721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
val03016
]
VDBG_09721
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_09721
Transfer RNA biogenesis [BR:
val03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
VDBG_09721
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
VDBG_09721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-5
IBN_N
Xpo1
Motif
Other DBs
NCBI-GeneID:
9531906
NCBI-ProteinID:
XP_003000001
UniProt:
C9SXU6
LinkDB
All DBs
AA seq
1238 aa
AA seq
DB search
MASAHSNGAAGIGSSNGGEVDILSQIHQALEVVHAPYSANEARREAQEFLENVKAVDEAP
FHGYTLASNKSQPAVVRHYALSLLDNAIKHKWADYTTEQASTLRGWMLELCQGISQADPL
YIRNKTAQLWVEVAKRSWGTEWMDMDELLVQLWQVPDSAVHKELVMTVLETLGYETFFGD
DVVVAMRQGVLCKGWTEITTPTAVLAEAIKNRNPAPEQCLNGDINGNSEVRSCAVKALSV
LSTLMPCTIPKGTAASKVVPVASRALAASQVSVQKMLSLLGNYLDRKFSVVPTGSDIDGF
LNLLVVVAQSQSLIVSIPVLVTWTRLLNNRLIGQSSANSQLIGPLLELCGSRLIRYENLP
EDTQDATYLFLMEDTDTMPERHAFLGNYRRYSMQVIEAIVQLKPSDAISHILGQTEQVLH
HLYDGQPSLNVAAYAKHSMPVLRADAHLTVIDAANKGYMKWRANPIQRGNPDYRSSLEDG
LESWCHRLLDMNFEDPMIRKRVLQILVLMSTSALDKRPQFMLKVLEHILMTWPAPQPEHR
AFNEAIKDFQSESMFELQRLASKVPDHLLAVYDQVETRVRDMVTSGTLDEKRQIAYQTFL
FIIVHRASNIDPQVQMQRLEGFIEPIKAQWQNPELKQALSSYSGFCELMALDKAKAYLRN
HGAHTVSDWGACELDAEGLALQAELEDRQKMLPLRPTKSFLSYSVEKLEKSSQPFQASYR
LWNNEAFQAILPDLLQFLSHAHASHNPDNWPEFPNEMGTVVKRVLSDRFWQAGISEGSKD
EFYARVTDRKGTLEGLASTIRGSVRFVRETCYAIIYCMSRLETYFYGFGELPSPLAEALF
QNAVHLSAHQQINLLNLTRYLVDDCPLEQREHFLPPLLANCFRQMDAKISSEWKRLEDQQ
KIDVGSDDLTEEMKSESILRQVTHTAVIMVADFLDPTKRNPAPLRPQDPPKRYPTLRKFC
LMHSSIVEPLLLFSTHAIRMRDGRCCNIILRVFRSIVPDFQSSDVTAAGGDGHTPQDGGA
DPWLDTTAIDHERATQIREYISTQVLEACVTSFHEPYFVDLQKDLASLIAAIVVHYMTLT
DSPKNFLLSIPGVKFKDFEKLGEFAQKPSSGSRQQRALVLHLLKDVKGVSMAEMHKLPKS
GLPAVQKKPARSKMAQEFMTPADEAGSKGQPSTGVADDSLIGLANLFDAVRPSHRTLPVL
YRGSSLYENDLRYNGGRAGAMAPKCLRPYSWWSSRDGG
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcgcattccaatggcgctgccggcatcggctcgtcaaacggcggggaggtc
gatatcctctcccagattcaccaggccctcgaggtcgtacacgccccctactcagccaac
gaagctcggagggaggcgcaagagttcctcgaaaacgtcaaggccgtcgacgaagccccc
ttccacggctacaccctggcctcgaacaagtcgcagcccgccgtggtccgacactatgcg
ctctcgcttctcgataatgccatcaagcacaagtgggccgactacaccaccgaacaggcc
tcgaccctcagggggtggatgctggagctgtgtcagggcatctcgcaagccgatccgttg
tacatcagaaacaagacggcccagctctgggtagaggtggcaaaaaggtcgtggggcacc
gagtggatggacatggacgagctgctggttcagctttggcaggtgcccgactcggccgta
cacaaggagctcgtcatgacggttctcgagacgctgggctacgagaccttctttggcgat
gacgtcgtggtggctatgaggcagggggtcctttgcaaaggttggacagaaatcaccacg
cccaccgctgtgctggccgaggcgatcaagaaccgcaacccagcccccgagcaatgtctc
aacggcgacatcaacggcaacagcgaagtgcgttcctgcgccgtgaaggcgctctccgtc
ctcagcacgttaatgccgtgcacgatccccaagggcacggcagcctcgaaagtcgtcccc
gtcgcctccagagcgctcgctgcttcccaagtgtctgtccaaaagatgctgtccttactt
ggaaattatcttgatcgcaaattctccgtcgtccccacgggatcagatatcgatggtttc
ctgaatcttctcgttgttgtagcgcaaagccagagcctcattgtgtccatccctgtgctt
gtaacgtggacccgtctcctcaacaacaggttaatcgggcaaagctctgccaactcacag
ctcattgggcctctgcttgaactgtgcggttcgaggctcatcagatacgagaacctgccc
gaagacacgcaagatgccacctatctgttcctcatggaggacacagacactatgcccgag
aggcatgctttcctaggcaactaccgtcgctacagtatgcaagtcattgaggcaattgtc
cagctgaagccgtccgacgccatctcgcacatcctgggccaaaccgaacaggtgctgcac
catctgtacgatggacagccgagcctgaatgtcgccgcatacgcgaagcattccatgcct
gttctacgcgccgatgcccacttgaccgtaatcgatgcggccaacaagggctacatgaag
tggagggccaacccaattcaacgcggcaatcccgattatcgatcgagcctcgaggacggc
ctcgaatcttggtgtcacaggcttctggatatgaacttcgaggacccaatgattcgcaag
agagtactgcaaatcctagtcctcatgtcaacatcagcgctcgataagagacctcagttc
atgctgaaggtcttagagcacatcctaatgacgtggccggcgccccagccggaacaccgt
gcctttaatgaggccatcaaggacttccagtctgaaagcatgttcgaactgcagaggcta
gcatccaaggtccccgatcatctgcttgctgtttatgatcaagtcgagacgcgggtccgt
gacatggtcacatcggggacgctcgacgagaagcgacagattgcctatcaaacatttcta
ttcatcatcgttcaccgggcgagcaacattgacccccaggtccagatgcagcgattggaa
ggttttatcgagccaatcaaggctcagtggcagaaccccgagctcaagcaagccctttcg
tcatactctggcttctgtgagctgatggcgctagataaagcgaaggcctatctcaggaat
catggagctcatactgttagcgactggggcgcgtgcgagctggatgctgagggccttgct
ctgcaggcggagctcgaagacaggcaaaagatgctgcccctccgaccgaccaaatctttc
ctgtcttactcggtcgaaaagctggaaaagtcttcccagcccttccaggcatcatacagg
ctctggaataacgaagccttccaggccatcttgcctgatcttctgcaattcctcagccat
gcccatgcatcgcacaaccccgacaactggcccgaatttcccaatgagatgggcactgtc
gtcaagagggtgctcagcgatcgcttttggcaggcaggcatctcggaaggcagcaaagac
gagttctacgctcgcgtaacggataggaaagggacgttggaaggacttgcatcgaccatc
agaggctcggtgcggttcgtgcgagagacatgctatgcgattatttactgcatgagccgg
ctcgagacgtacttttacgggtttggcgaactgccaagccccctcgccgaagcgttgttc
cagaacgcagtccacctgtctgcccatcaacagatcaatctgctcaacctgacgagatac
ctggtggacgattgtccactggaacagcgcgagcacttcctgccgccgctcctggcgaat
tgcttccgacagatggacgcgaagatcagttccgaatggaagaggctcgaggaccagcag
aagattgacgtcggaagcgacgacctgaccgaggagatgaagtcggagagcatcctgcgg
caggtcactcacacggcagtcatcatggtcgccgatttccttgacccaacgaagcgaaac
cccgcgccgctgcggccacaggatcctcccaaacgatacccgacgctgagaaagttctgt
ctcatgcactccagcatcgtcgagcctcttcttctgttcagcacgcacgctatccgaatg
agagatgggaggtgctgcaacattattctgcgtgtcttccgatcgatcgtgcccgacttc
cagtcgtccgatgtcacagctgcaggcggcgatggccacacaccacaggacggcggcgcg
gatccctggctcgacacgacggccattgaccatgagagggccacccagattcgcgaatac
atctcaacacaggtgctcgaggcctgcgtgacatccttccacgagccgtactttgttgac
ctgcagaaggatctcgcgtcgctcatcgcggcgatcgtggtccactacatgacgctgacg
gattcgccgaagaatttcctcctcagcatcccaggcgtcaagttcaaagactttgagaag
ctcggggagtttgcgcagaagcccagctccgggtcgcgccaacagcgggcgctcgtgctg
catcttttgaaggacgtcaagggcgtgagcatggccgagatgcacaaactacccaagagc
gggctgccggctgtgcagaagaagccggcacgcagcaagatggcgcaggagtttatgacg
cctgcggacgaggcggggtccaagggccagccatcgacgggcgtcgcggacgatagcctc
attgggcttgccaacttgttcgacgctgttcggccctcccacaggacgctccccgtattg
tatcgcggttcatccctttacgagaacgacctcaggtacaacggcggtcgagccggcgcc
atggctccaaagtgcctgaggccgtactcttggtggtcctcaagggatggaggttga
DBGET
integrated database retrieval system
