Verticillium alfalfae: VDBG_09738
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Entry
VDBG_09738 CDS
T02227
Name
(RefSeq) U3 small nucleolar RNA-associated protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
val
Verticillium alfalfae
Pathway
val03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VDBG_09738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
val03009
]
VDBG_09738
Ribosome biogenesis [BR:
val03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
VDBG_09738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D6
Nrap
Nrap_D3
DmpG_comm
Motif
Other DBs
NCBI-GeneID:
9531923
NCBI-ProteinID:
XP_003000018
UniProt:
C9SXW3
LinkDB
All DBs
AA seq
843 aa
AA seq
DB search
MESGAKRRKVSHNGDAPKSKRSVAMATASPFVLQTEELLKEVKVDYAETFDGADALLKQI
KHVIDGIAPQEAAPISDATRKFQKKHHIQIPFPDPKPAADAPYKLAYAKPAACNVVGSYV
SRTMIQGQEDKCVDMIVQMPASLFQDKDFQTMRYFYRRAYYIANIAAGVREALGSSVDLL
FENLNENSLLPILTILPKVESESLNMPSASSPAPPTASSPSPSSSPPQTTTRADGADAPT
PFYNSTLKAEETFVTYLRVLTPREDPVQSLRGCLHPRQAHGVMVRRPSRKKEAARFRQFW
GDKSELRRFKDGSILECVPWKQTSAAGICEEITRYVLKLHASVEESNIHFYGGKTPDGLE
FTPVDKEAFDTARRAFQTMEHDLRSLEDLPLSIRRLAPVVPELRYASIQPPVIGFHKGTA
VPMDVTLTFEASSKWPENVVAIQEAKIEFLLDIDRRLKAAKDNITTCLGRDNAVRDSDNL
AFLDVVYENGAAFRLRVHSDPEETLLERQAKNKTLDPYVRLAAEETLHKIRWQNNDLPLH
TQSIASFCTRLPALSPAIRMTKHWFNSHKLTGHISEELIELLVLHVFLRPHPWKIPSSAQ
SGFLRTLLFLSRWDWRTQPLVVDFSDDMSPADAALSQTTLAAWRARDPTMNHAVLFVATS
HDPTGQSYTRTAPTKLSATRMTRLAKSAVRLVREQDVALEIDALFEPSLADYDFLLHLSS
KETKRVLRDAAADAGARHSAFKNLDARTGKVPLPLARHPVDVLLGELEAAYEDSLIFFRG
SRGDAVVGAIWQPKLRRQAFRVGLPFNFSAVGDGAEVEVNKEAVLLEIARIGGDMIKRIE
VAE
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggagtctggcgccaagcgacgcaaggtctctcacaatggcgacgcccccaagtccaaa
cgatccgtcgccatggccacggccagtcctttcgtcctgcagaccgaagagctcctgaag
gaggtcaaggtcgactacgcagagacctttgacggcgccgacgcccttttgaagcagatc
aaacatgtcatcgacggcattgccccgcaggaggccgcccccatctccgatgccacgcgc
aagttccagaagaagcaccacatccagatcccctttcccgaccccaagcccgccgccgac
gccccctacaagctcgcctacgccaagcccgctgcctgcaatgtcgtcggcagctacgtc
tcgcgcaccatgatccagggccaggaggacaagtgcgtcgacatgattgtgcagatgccc
gcctcgctcttccaggacaaggacttccagaccatgcgctacttttaccgtcgcgcctac
tatatcgccaacattgccgctggcgttcgcgaggccctggggtcgtctgtcgaccttctg
ttcgagaacctcaacgagaacagccttctgcctattttgaccattcttcccaaggtcgaa
tcggagagcctgaatatgccatccgcatcatcccctgcgcccccgacggcctcttcgcca
agtccaagctcatctccaccgcaaacaacaacaagggccgacggcgcagacgccccgacc
ccgttctacaactcaaccctcaaggctgaggagacattcgtcacatacctgcgcgtcttg
accccgcgcgaggacccagtgcaaagccttcgcggatgcctgcatcctcggcaagcccat
ggagtaatggtccgtcggccgagtcgcaagaaggaagccgccaggttccgtcagttctgg
ggtgacaagtcggagctgcgaagattcaaggacggcagcatcctcgagtgtgtcccttgg
aaacagacatctgcggcgggcatctgcgaggagattacccgctacgtgctgaagctgcac
gcgagcgtcgaggagagcaacatccacttctacggcggcaagacgccggatggtctcgag
ttcacgcccgttgacaaggaggctttcgacacggcgaggcgcgctttccagacgatggag
cacgaccttcgcagtctcgaggacctgcccctttccatcaggcggttggcgcctgttgtg
cccgaactccgctacgcctcgattcagccgcccgtcatcggcttccacaagggcactgcc
gttcctatggacgtgacgctcacgttcgaagcgtcgagcaagtggcctgagaatgtggtg
gcgatccaggaggccaagattgaattcctgcttgacattgacaggaggctgaaggccgcc
aaggacaacatcacaacgtgcctcggccgtgacaatgccgtccgcgactcggacaacctg
gctttcctcgacgtcgtctacgagaacggcgcggcgttccgcctgcgcgtccactcggat
cccgaggagacacttctcgagcgccaggcgaagaacaagacgctcgacccctatgttcgg
ctcgccgccgaggagacgctacacaagatccgttggcagaacaatgacctgccgctccac
acgcagtccatcgccagcttctgcacgcgcctccccgctctctcgcccgcaatccgcatg
accaagcactggttcaacagccacaagctgacgggccacatttccgaggagctcatcgag
ctcctcgtgctccacgtcttcctgcgcccgcacccgtggaagatcccctcgagcgcgcag
tccggcttcctgcgcaccctcctcttcctctcccgctgggactggcgcacgcagcccctc
gtcgtcgacttttccgacgacatgtctccagcggacgcggcgctgtcgcaaacaacgctc
gcggcctggcgcgcgcgcgaccccaccatgaaccacgccgtgctcttcgtcgccacttcc
cacgacccaacgggccagtcgtacacacgcacggcgccgacgaagctctcggcgacgcgc
atgacgcgccttgccaagtcggccgtccgcctcgtccgcgagcaggacgtcgcgctcgag
attgacgccctcttcgagccgtccctcgcagactacgacttcctcctccacctctcgtcc
aaggagacgaagcgcgtgctccgcgacgccgccgccgacgcgggtgcgcgccactcggcg
ttcaagaacctcgacgcccggacgggcaaggtgccgctcccgctggcacggcatcccgtg
gatgtgctgctcggcgagctcgaggccgcgtacgaggacagcctcatcttcttccgcggc
agccgcggggacgccgtcgtcggggccatctggcagcccaagctccggaggcaggcgttc
cgggtcggcctgccttttaacttttcggccgtcggggacggggccgaggtcgaggtgaac
aaggaggccgtcttgttggagattgcgaggattgggggggacatgatcaagaggatcgag
gttgcagagtag
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