KEGG   Verticillium alfalfae: VDBG_09866
Entry
VDBG_09866        CDS       T02227                                 
Name
(RefSeq) WD repeat-containing protein
  KO
K20408  SEA/GATOR complex protein SEA2/WDR24
Organism
val  Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:val00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:val04131]
    VDBG_09866
Membrane trafficking [BR:val04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    VDBG_09866
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_RIG_1st MIOS_WD40 Beta-prop_SPT8 Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 9531781
NCBI-ProteinID: XP_002999826
UniProt: C9SY91
LinkDB
AA seq 1145 aa
MADPRKLRTAPATLPSRAHYDHDGGRPWGRSPRHGPPCIAAITRSCESSLGKASADNSTD
TTSPGIGITSAPHLPASYRPNFSQYAVYDATYPIYSIDAPADRRSVVLASRHVLKTVIFD
GLHIVDGVDVRAAIVSASNPNKGASSATADQLSVKEVKWHKDSTIFTVCTNGKIFSYDLA
RIAAGGSPMDCVQMREDSRQVNTLDINPHRPSLLLSGSQDGFVRYFDIRAPVQSRAGGMT
YQAKAAFKCNADGVRQVRWSPKEGMYLACGTDGGVVLKWDLRKPTTPLLRITAHEKACTS
ISWHPDGNHLVSGGMDQKCAVWDFSKDADKRQKPKWTIQTPAPVSVVSWRPGLWSASAQG
KRAAQIAVSYDDASLKRFGVRAAHVWDLARPTIPFKELNWFNSPPSSLMWLDQDLLWAAG
EDGKFHQCDVAFAPKTMDRMTSSSMAFSSCGDVAMFLDERPHQRPRPTAVHRKEGNETPR
SVYGSSPTTPQLSISRSDSEDDAVGSFLGPRRKPSRKRRPSVRSIPALSTTPPSGSADGE
PVLSLEHAMRVTGVYKTQQAMAVGRVPAAAKVNHYHYLSQCYLETLDRELPQREGGKALV
DRVVIILNEFAYAAEGVGQFRLAQTWRILGYAMDLLLRRRAQYHLERRLGHFQKRPSVTK
SKDGVVKTADLKGFQGLSQDSMRAPNPLRRASAVSVQLESRSLSVRSLLSEEIESTSNVP
TPLARPVHEDDPNTDHGNLRPGKKLTPVFELDSFALPPAVHNVPEPEKKDEAQSPGGGGG
GSRSKRPPKVMRHDSDDSFSQMFSISDGSRKSANLSLPKAGAASEIKKSEFEPVQEHNDE
HGEYESRIRGKEIEESPEVHNLSSMQMRRGLLPMSNSPEEVFMISQTTIGDDEDPSEVSA
RRSQSNLTTSPGPDDPPYPQKLASELNNKGYTIPSPPLDPYGLITSTLDFELRTSNLNAA
AMILLLRPLVPEALIDAHRAASILRAYHARLASMRHFVEAALLRNLCVKGWPESLPEWGE
SYTAIFGPAQQGVKAGFLCPSCRKPQEVGRAALDKARAQAQVQRKTSLSGGRGRGPPSPG
VAIRGDGVEVPQSRAVESVREALASGGGAAMSSGPGASILSSSPGRAGERDRERRKSVKF
VPTDR
NT seq 3438 nt   +upstreamnt  +downstreamnt
atggcagatcctcgcaagctccgaactgcacccgctaccctgccatcaagagcacactac
gaccatgacgggggacgcccatgggggcgttccccgcgacacggcccaccatgtatagcc
gcgataacaagatcatgcgaaagctccctcggaaaggcttccgccgacaactctaccgac
acgacgagccccggcattggcatcacgagtgcgccgcatctgccagcttcgtatcgcccc
aacttttcgcagtatgccgtctacgatgcgacctaccccatttacagcatcgatgccccg
gccgaccgtcgctccgttgtcctggcaagtcgccatgtcctcaagacggtgatctttgac
ggcctccatatcgtcgatggcgttgacgtccgagctgccatcgtctcggcgtccaatccg
aacaagggcgcatcgtcggcgacggccgatcagctctccgtcaaggaggtgaaatggcat
aaggactcgaccatcttcactgtctgtaccaatggcaagatcttctcctacgatctcgcg
aggatagccgccggtggctcccccatggattgtgtccagatgagggaggattcgcgccaa
gtcaataccctcgacatcaacccccatcgcccgagcttgctgctctcgggcagccaagat
ggtttcgtacgctactttgacatccgcgcgcccgttcaaagccgcgctggcggcatgaca
taccaggccaaagcagcctttaaatgcaatgccgatggcgttcgacaggtccgctggtcg
ccgaaggagggcatgtatctggcatgtggcaccgacggtggcgtggtcttgaagtgggat
ttgcgaaagccgaccacgccgctgctgcggatcacggcacacgaaaaagcctgcacgtct
atttcgtggcatcctgatgggaaccatctggtcagtggcggcatggatcagaagtgcgcc
gtctgggacttctccaaagacgctgacaagcgccaaaagccgaagtggacgattcaaacc
cccgcccctgtatctgtcgtcagctggaggcctgggctgtggtctgccagtgcgcagggc
aagcgtgccgcccagattgccgtgtcttacgacgatgccagtctcaagcgtttcggagtc
cgcgcggcccatgtttgggatctcgcgaggcctaccatcccgttcaaggagctcaactgg
ttcaactcgccgccatcaagcctcatgtggctcgaccaagatcttctctgggctgctggt
gaagacggcaaatttcaccagtgcgacgttgccttcgccccgaagaccatggatcgaatg
acgtcctccagcatggccttctcttcatgcggagacgtggctatgtttctcgatgaaaga
ccgcatcagcggccgagaccgactgcggtgcaccgcaaggagggcaatgagacacctcgt
tccgtctacgggtccagccctacaacaccccagctcagcatcagtcgcagcgattccgaa
gatgatgctgttggcagctttcttgggccacggcgcaagccgagccggaaaaggcggcct
agtgtacgctccatacccgcactcagcacaacgccgccgtctggatccgcagatggggag
cctgtattatctttagagcatgccatgagagttactggggtgtacaagacacagcaggcc
atggcggttggacgcgtccctgctgctgccaaggtcaaccactatcattacctttcccag
tgctatctcgagacactggaccgcgaattaccgcaaagagaaggcgggaaagcgcttgtg
gaccgtgttgtgattatactgaatgagtttgcctacgctgcggaaggtgttggccaattt
cgactagcacaaacgtggcgcatattgggatacgccatggaccttctcctcagacgaaga
gcccagtaccatctcgagagaaggttgggtcatttccagaaacgaccttcagtaaccaag
tcaaaagatggagtcgtcaaaaccgccgatctcaagggtttccaggggctgagccaggac
agtatgagagcgccaaatccgcttcgccgcgccagtgcggtgtcagtccagttggagagc
cgctccctctctgtcagatcccttctttcggaagagatcgaaagcacctccaacgtacca
acaccactcgcaaggccggtgcatgaagacgatcccaatacagatcacggcaacctcagg
cccggcaagaagttgacacccgtctttgaactagacagtttcgccttacccccagcagtc
cacaatgtcccagagccagagaagaaggatgaagcgcaatcacccggtggtggaggtggt
ggatctcgttcgaagagacctcccaaagtgatgaggcacgactcggatgacagcttctcg
caaatgttctccatttcagatgggagtcgaaagtccgccaatctttccctgccaaaagca
ggcgccgcaagcgagatcaaaaagtccgagtttgaacccgtgcaagagcacaacgatgag
catggcgaatacgagagccgcatccgagggaaagagatcgaagagtcacccgaagtccac
aacctgtcctccatgcagatgaggcgaggcttgctgccgatgagtaactcccccgaagag
gttttcatgatttcacagacaaccattggcgacgatgaagacccttcagaagtctcggcg
cgtcggtcacagtcaaatctgactacctcccctggtcctgatgatcccccttatccgcag
aagttggcgtccgaactcaacaacaaaggctacaccattccatccccgcccctcgaccca
tatggtctcatcacgagcactctcgattttgaactccgcacatccaatcttaacgctgcg
gcaatgattctacttctcaggccgttggttccggaggcactcatcgacgcccaccgcgca
gcctcaatcctgcgcgcatatcacgctcgactcgcgtccatgcggcacttcgtcgaggcc
gcgcttttgcgaaacctttgtgtcaagggctggcctgagagcctccctgaatggggcgag
tcttacacagcaatcttcggccccgcccaacaaggcgtcaaggcgggcttcctgtgccct
tcgtgccgcaaaccacaggaagtcggacgtgcggcgctcgacaaggcgcgtgcgcaggcg
caggtgcagcgcaagacgagcctgagcggcgggcgaggcagaggtcctccgtcgccagga
gtggccattcgaggagacggtgtcgaggttccgcagagtcgggccgttgagagcgtgcgc
gaggcgctggcgagcggaggcggtgctgccatgagctcgggtcctggggccagcatcctc
agctcaagtcctggccgagcaggggagcgagaccgcgagagaagaaagagcgtcaagttt
gtgccgacggaccgctag

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