Verticillium alfalfae: VDBG_09871
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Entry
VDBG_09871 CDS
T02227
Name
(RefSeq) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
val
Verticillium alfalfae
Pathway
val00040
Pentose and glucuronate interconversions
val01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
val00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VDBG_09871
Enzymes [BR:
val01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
VDBG_09871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-GeneID:
9531786
NCBI-ProteinID:
XP_002999831
UniProt:
C9SY96
LinkDB
All DBs
AA seq
255 aa
AA seq
DB search
MKFSAVLAALGAAVAIASPAVNNVTPNTVGALERRAAFPIPASKGSVTYKKVQTIKGVFD
GGLKTYGRGVKCTGQKEGGDADAVFILENGATLKNAIIGADQIEGVHCKGACTIENVWWK
DVCEDALSIKGDGNALIRGGGAQSASDKVIQHNGLGTVTIDGFTVVDFGKLYRACGNCKK
MGRRNVVIKNVKAYNGKLLAGINSNKGDVATISNTCSTSVKKVCTEFNGTTPGNEPKEIR
SGPSASCKYTTVKAC
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctccgctgtcctcgctgccctcggtgccgccgtcgccatcgcgtcccccgcc
gtcaacaacgtcacccccaacaccgtcggtgctctcgagcgccgcgccgctttccccatc
cccgcctccaagggctccgtcacctacaagaaggtccagaccatcaagggtgtcttcgac
ggtggcctcaagacctacggccgtggcgtcaagtgcaccggccagaaggagggcggtgac
gccgatgccgtcttcatcctcgagaacggcgctaccctgaagaacgccatcatcggcgcc
gaccagatcgagggtgtccactgcaagggcgcctgcaccatcgagaacgtttggtggaag
gatgtctgcgaggacgccttgagcatcaagggtgacggaaacgctcttatccgaggagga
ggagcccagtctgcttctgacaaggttatccagcacaacggtctcggaaccgtgaccatt
gacggcttcaccgtcgtcgacttcggcaagctgtaccgcgcttgcggtaactgcaagaag
atgggccgccgcaacgtcgtcatcaagaacgtcaaggcctacaacggcaagctcctcgcc
ggcatcaacagcaacaagggtgacgtcgccacgatcagcaacacctgctccaccagcgtg
aagaaggtctgcaccgagttcaacggcaccacccccggcaacgagcccaaggagatccgc
tcgggcccttctgcctcttgcaagtacaccaccgtcaaggcttgctaa
DBGET
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