Verticillium alfalfae: VDBG_09932
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Entry
VDBG_09932 CDS
T02227
Name
(RefSeq) exosome complex exonuclease RRP41
KO
K11600
exosome complex component RRP41
Organism
val
Verticillium alfalfae
Pathway
val03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VDBG_09932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_09932
Messenger RNA biogenesis [BR:
val03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
VDBG_09932
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
VDBG_09932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
9531772
NCBI-ProteinID:
XP_002999892
UniProt:
C9SYF7
LinkDB
All DBs
AA seq
155 aa
AA seq
DB search
MPLDTSTYGLSLLRVDGRRWNELRRLQAQIRTQDAADGSSYLEIGHTKVMCVVTGPTEPQ
RRGPAGGQSKDAAVNVSIVVAGFSSVDRRKYGRNDKRISELEATVSKAFASTLHTHLFPH
SSIYISLHVLSQDGSLLAALLNATTLALVDAGHSP
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcgacacctcgacgtacgggctctccctcctccgggtcgacggccggcggtgg
aacgagcttcgacggctgcaggcccagatccgcacgcaggacgccgccgacggctcgagc
tacctcgaaatcggccacaccaaggtcatgtgtgtcgtcacgggcccgaccgagccgcag
cgccgcgggcccgcgggtgggcaatcgaaggacgccgccgtcaacgtgagcattgtcgtt
gcgggcttcagctcggtcgacaggaggaagtacggccggaatgacaagcgcatctccgaa
ctcgaggccaccgtttccaaggcctttgcgtcgacgctgcacacgcacctcttcccgcac
agctccatctacatctccctgcacgtactctcgcaagatggctcgctgctcgcagcgctg
ctcaacgcgacgacgctggcgctcgtcgatgcggggcattccccatga
DBGET
integrated database retrieval system
