Verticillium alfalfae: VDBG_09973
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Entry
VDBG_09973 CDS
T02227
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_09973
Enzymes [BR:
val01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VDBG_09973
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VDBG_09973
Prokaryotic type
VDBG_09973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
BIR
Usp
Motif
Other DBs
NCBI-GeneID:
9531810
NCBI-ProteinID:
XP_002999933
UniProt:
C9SYJ8
LinkDB
All DBs
AA seq
589 aa
AA seq
DB search
MPPKRGAKRQLSASAVTSDVQPASKKAKDPLREPHPFYKDAEEHGIVLRKYYPHEMSNDR
ARAYNNNELPRPIEELTSALADTSMTRKGVKVGAAVVHWFKMDLRLSDNTSLRLASERAK
DAGVPLIAMYIISPQDFEAHLTAPIRVDFTLRTLEILKHDLAKLDIPLHIETVEKRRQIS
DRIVELMGEWGATHLFANMEYEVDELRREAKLVRTFADKGMSFEAVHDTCVVPPGQLQTG
TGKQYAVYTPWYRSWMRHVHENPDRLELFDHPNKNPSSAKERFGNLFASEIPEEVPNKTL
GAEEKKRFRALFPAGEHAARERLDKFCDGSISSYADRRNIPGDNGTSSLSMHLASGTISS
RTCVRTARDRNKTKKLDGGNGGIQTWISEVAWRDFYKHVLVHWPYVCMNKPFKPEYANIE
WSYEKDDFKAWCEGKTGFPIVDAAMRQMIHVGWMHNRCRMIVASFLCKDLLIDWRMGERF
FMEHLVDGDFASNNGGWGFSASVGVDPQPYFRIFNPLLQSEKFDPDGEYIRKWVPELAGV
KGKAIHDPYGRGAGPQAKKKGYPEPIVAHKDVRERALTEYKRGLGREDL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaaacgcggcgcgaagcgccaactgtccgcctcagccgttacctctgatgtg
cagccggcgtcaaagaaagcgaaagatcccttgcgcgagccgcatcccttttataaagac
gcagaagaacatggcatcgtccttcggaagtactaccctcacgagatgagcaatgatcgg
gcccgcgcctacaacaacaacgaacttcccaggcccatcgaagaactcacctctgcgctg
gccgatacatccatgactcgtaagggcgtcaaggtgggggctgccgtcgtgcactggttc
aagatggatctgaggctatcagacaacacgtcgctccgcctggcgagcgagagggccaag
gacgctggtgtgcctctgattgctatgtacattatcagtcctcaggatttcgaggcccat
ctgacggctcctattcgtgttgactttacgctacgaacattggaaatcctgaaacacgac
ctcgctaaactggacattccgcttcacattgagactgttgagaagaggagacaaatttct
gatcgcattgtcgaacttatgggagaatggggagcgacacacctcttcgccaacatggag
tacgaagtcgacgagctacggagggaagccaagttggtgcgcacattcgctgacaaaggc
atgtcgttcgaagccgtgcatgatacctgtgttgtgcccccgggccaattgcagactggc
accggaaagcagtacgccgtatatacgccatggtaccgatcttggatgcgccacgtccac
gaaaacccggatcggttggaactgtttgaccatccgaacaagaaccccagcagtgcaaag
gaaaggtttggcaacctattcgcgtcggaaatcccggaggaggtgccgaacaagaccctc
ggtgctgaggagaagaagcgcttccgagcacttttcccagccggagagcacgcagctcgc
gaacggctggacaagttttgtgacggcagcatcagctcttacgcagatcggcgcaatatc
ccaggcgacaacggtacctcttcactctcgatgcatcttgccagcgggaccatcagctcc
cggacttgcgtcaggacagcaagggaccgcaacaagacaaagaaactcgatggtggaaac
ggcggcattcaaacatggatcagcgaggtagcctggcgggacttttataagcatgttctg
gttcactggccctatgtctgcatgaacaagcctttcaaacccgaatacgccaatattgaa
tggtcttatgaaaaggatgatttcaaggcttggtgtgagggaaagacaggtttcccgatt
gtcgacgctgccatgcgtcagatgatccatgtgggctggatgcataaccgctgtcgcatg
attgtcgcatcctttctctgtaaggatcttctaatcgactggcgcatgggtgagcggttc
tttatggagcacctggtggatggtgatttcgcatccaacaacggcggctggggctttagc
gccagtgtcggtgtcgacccgcagccgtactttcgcatctttaaccctttgctacagagc
gaaaagttcgatcccgatggcgagtacattcgcaaatgggtcccagagctagcaggtgtc
aagggcaaggcgatacacgatccatatggacgcggcgcagggccgcaagcgaagaaaaag
ggctatcctgagcctatagttgcgcacaaagatgttcgcgaacgagctttgacagagtac
aaacggggtctgggccgggaggatctgtag
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