Variovorax sp. PMC12: C4F17_00120
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Entry
C4F17_00120 CDS
T05380
Name
(GenBank) amino acid ABC transporter permease
KO
K05845
osmoprotectant transport system substrate-binding protein
K05846
osmoprotectant transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_00120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_00120
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
C4F17_00120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AVQ79471
LinkDB
All DBs
Position
1:complement(24615..26171)
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AA seq
518 aa
AA seq
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MHLPRCLRRLALVLTLAWLGLAHVANVAHAADDTLRVGSKRFTESYILAELLAQTAAPHT
ASPPVVRQGLGNTAIVYEALRSGAIDMYAEYTGTIALEILKGSPADTREAMNAALAPMGL
GVAIPLGFNDGYALAVRAADADRLGLRTLSDLAKHPELKLGLSNEFIGRADGWKGLAERY
GFKQTPSGLDHGLAYDAIGARQIDAIDIYTTDAKIDHLGLRVLEDDRKYFPRYDAVVLYK
LDLPNRLPEAWAALKTLEGSVDEHAMIAMNARAELQSVPFDVIARDFLASSGKEAKAGQQ
QPKEERRGFTAKLFGPDLWKLARQHLFLVALSVGVAILIGVPIAILVFPHVRLRALVLGF
ASLLQTVPSLALLAVLISMLGAIGALPALIALTLYSLLPIMRNTVTGLAEVPDGLRLAGT
ALGMTPPQSLRLVLLPLALPTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGLALND
RELLMAGALPAAALALVSEGLFELIELWMRRGRGALAA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgccccgttgcctccgccgccttgccctggtcctgacgctcgcctggctgggc
ctggcgcatgtagcgaatgtcgcgcatgcggcggacgacacgctgcgcgtcggctccaag
cgcttcaccgagtcgtacatccttgccgagttgctggcgcagaccgccgcgccgcacacc
gcgtcgccgcccgtcgtgcggcagggcctgggcaacacggccatcgtgtacgaggcgctg
cgctcgggcgcgatcgacatgtatgccgaatacaccggcaccatcgcgctggaaatactc
aagggctccccggcggacacgcgcgaggccatgaacgcggcgctcgcgccgatgggcctg
ggcgtcgcgattccgctgggcttcaacgacggctatgcgctcgcggtgcgcgcggccgat
gccgaccggctgggcctgcgcacgctgagcgacctggcgaagcaccctgaactcaagctg
ggcctttccaatgaattcataggccgcgccgacggctggaagggcctggccgagcgctac
ggcttcaagcagacaccctcggggctcgaccacgggctggcatatgacgccataggggcc
aggcagatcgacgcgatcgacatctacaccaccgacgcgaagatcgaccacctgggcctg
cgcgtgctggaggacgacaggaagtactttccgcgctacgacgcggtggtgctctacaag
ctcgatttgcccaaccgcctgcccgaggcctgggctgctttgaaaacgctcgaaggcagc
gtggacgagcacgcgatgatcgcgatgaatgcccgcgccgaactgcagagcgtgcccttt
gacgtgattgcgcgcgactttctcgcgagctccggcaaggaagcgaaggcggggcagcag
cagccgaaggaagagcgccgcggcttcaccgccaagctgttcgggccggacttgtggaag
ctggcacggcagcatctgttcctggtggcgctgtcggtcggcgtcgcgattctcatcggc
gtgccgatcgcgatcctggtgttcccgcatgtgcggctgcgcgcgctggtgctgggcttc
gcgagcctgttgcagacggtgccttcgctggcgttgctggcggtgctgatctcgatgctc
ggcgccatcggtgcattgccggcgctgatcgcgcttacgctctattcgctgttgccgatc
atgcgcaacacggtcacgggcctggccgaggtgcctgacggcctgcggctggcgggcacg
gcgctgggcatgacgccgccgcagagcctgcggctggtgctgttgccgctggcgttgccg
acgctgctcgcgggggtgcgcacggcgacggcgatcgcgatcggcacggcgacgattgcg
gctttcatcggtgccggcgggttcggcgagcgcatcgtgacggggttggcgctcaacgac
cgggagctgctgatggcgggcgcgttgccggctgctgcgttggctttggtcagcgaaggg
ctgttcgagttgatcgagctttggatgcggcgcgggcgcggggcgcttgcggcctag
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