Variovorax sp. PMC12: C4F17_00170
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Entry
C4F17_00170 CDS
T05380
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_00170
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_00170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_00170
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_00170
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Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
AVQ79478
LinkDB
All DBs
Position
1:36019..37191
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AA seq
390 aa
AA seq
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MQRRHLIQTAALSALALSMSLASAQDNKFKIGLILPMTGQSASTGRQIEAAARLYMAQNG
DTVAGKKVELIVKDDTGLPDVTKRLAQELVVNDKVNVLAGFGLTPLALAVAPIATQSKTP
EVVMAAATSSITEASPYIIRSSFTLPQVSVAMGDWAPKNGVKTVVTLVADYGPGNDAEKF
FSERFQLNGGKVIEKLRVPLRNPDFAPFLQKVRDAKPDALFVFVPSGAGAAVMKQFLERG
MDKAGIKMIATGDVTDDDQLNDMGDGALGVVTSHHYSAAHPSAMNKKFVEAFEKANPKMR
PNFMAVGGYDGMRVIYEALKATKGQGGGEALLAAMKGQVFESPRGQVLIDAQTRDIVQDV
YLRKVEKKDGQLYNVEFDVIKNVKDPGKAK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacgccatctcatccagaccgcagccctgtcggcgctcgcgctttcaatgtcg
ctggccagcgcccaggacaacaagttcaagatcggcctgatcctgccgatgacgggccag
tcggcgtccaccggccgccagatcgaagccgccgcgcgcctgtacatggcccagaacggc
gacaccgtggccggcaagaaggtcgagttgatcgtcaaggacgacaccggcctgcccgac
gtcaccaagcgcctggcgcaggaactggtggtgaacgacaaggtcaacgtgctggccggc
ttcggcctgacgcccctggccctggccgtggcgcccatcgccacccagtcgaagacgccc
gaagtcgtgatggccgccgccacgtcgagcatcaccgaggcatcgccctacatcatccgt
tcgagcttcacgctgccgcaggtgtcggtggccatgggcgactgggcgccgaagaacggc
gtgaagacggtcgtcacgctggtggccgactacgggccgggcaacgacgccgagaaattc
ttcagcgagcgcttccagctcaacggcggcaaggtgatcgagaagctgcgcgtgcctctg
cgcaaccccgacttcgccccgttcctgcagaaggtgcgcgacgccaagcccgacgcgctg
ttcgtcttcgtgccctcgggcgccggcgcggccgtcatgaagcagttcctggagcgcggc
atggacaaggccggcatcaagatgatcgccaccggcgacgtgacggacgacgatcaactc
aacgacatgggcgacggcgcgctgggcgtggtcacctcgcaccactactctgccgcgcac
ccgtcggcaatgaacaagaagttcgtcgaggccttcgagaaggccaacccgaagatgcgc
cccaacttcatggccgtgggcggctatgacggcatgcgcgtgatctacgaggcgctcaag
gccaccaagggccagggcggcggcgaagcgctgctggcggccatgaagggccaggtcttc
gagagcccgcgcggccaggtgctgatcgacgcgcagacgcgcgacatcgtgcaggacgtg
tacctgcgcaaggtcgagaagaaggacggccagctctacaacgtcgagttcgatgtgatc
aagaacgtcaaagatcccggcaaagccaagtaa
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