Variovorax sp. PMC12: C4F17_00210
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Entry
C4F17_00210 CDS
T05380
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00280
Valine, leucine and isoleucine degradation
vam00650
Butanoate metabolism
vam00907
Pinene, camphor and geraniol degradation
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
vam04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
C4F17_00210
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C4F17_00210
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C4F17_00210
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C4F17_00210
Enzymes [BR:
vam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
C4F17_00210
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
AVQ79486
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Position
1:43456..44403
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AA seq
315 aa
AA seq
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MIHAFLPPRAVVREVGLRDGLQSIARVLPTERKLEWIRGAHAAGQREIEVGSFVPAHLLP
QLADTAELLAYAKTLPGLFASVLVPNLKGAERAIAGEADLMIVPLSASHAHSLANLRKTP
DEVVAEVGRIRAARDAAGSKTLIDGGVGTAFGCTLQGRVDPDEVLRLMQALLDAGADRVS
LADTVGYADPAMVRSLFERALRIAGDRLWCGHFHDTRGMGLANAYAALEVGITRFDACLA
GIGGCPHAPGASGNVDTEDLVFMLQSMGVETGVDLPKLLDLRRRVAGWLDGETLQGTVWR
AGFPKTFAVVEGVAA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttgattcacgccttcctgccgccccgcgcggtcgtccgcgaagtgggcctgcgcgacggc
ctccagagcatcgcccgcgtgctgcccaccgaacgcaagctcgaatggatccgcggcgcc
cacgcggccggccagcgcgagatcgaagtcggctctttcgtgccggcgcacctgctgccg
caactggccgacaccgccgaactgctggcttatgcgaagacgctgccgggcctgttcgcg
tcggtgctggtgcccaacctcaagggcgccgagcgtgccatcgcgggcgaggccgacctg
atgatcgtgccgctgtcggccagccatgcgcacagccttgccaacctgcgcaagacgccg
gacgaggtggtggccgaggtcggccgcatccgcgcggcacgcgacgcggcggggtcgaag
acgctgatcgacggcggcgtgggcacggccttcggctgcacgctgcagggccgtgtcgat
cccgacgaagtgctgcggctgatgcaggcgctgctcgacgccggcgccgaccgcgtgagc
ctggctgacaccgtcggctatgccgatccggcgatggtgcgcagcctgttcgagcgcgcg
ctgcgcatcgcgggcgaccggctgtggtgcggccatttccacgacacccgcggcatgggg
ctcgcgaacgcgtatgccgcgctggaggtcggcatcacgcgtttcgacgcctgcctggcc
ggcatcggcggctgcccgcacgcgcccggcgccagcggcaacgtcgacacggaggacctg
gtgttcatgctccagagcatgggcgtcgagaccggcgtcgacctgccgaagctgctcgac
ctgcgccgccgcgtggcgggctggctcgatggcgaaacgctgcagggcacggtgtggcgg
gcgggtttccccaagacctttgccgtggtcgagggagtcgccgcatga
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