KEGG   Variovorax sp. PMC12: C4F17_00210
Entry
C4F17_00210       CDS       T05380                                 
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
  KO
K01640  hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Organism
vam  Variovorax sp. PMC12
Pathway
vam00280  Valine, leucine and isoleucine degradation
vam00650  Butanoate metabolism
vam00907  Pinene, camphor and geraniol degradation
vam01100  Metabolic pathways
vam01120  Microbial metabolism in diverse environments
vam04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:vam00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    C4F17_00210
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    C4F17_00210
  09109 Metabolism of terpenoids and polyketides
   00907 Pinene, camphor and geraniol degradation
    C4F17_00210
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    C4F17_00210
Enzymes [BR:vam01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.4  hydroxymethylglutaryl-CoA lyase
     C4F17_00210
SSDB
Motif
Pfam: HMGL-like
Other DBs
NCBI-ProteinID: AVQ79486
LinkDB
Position
1:43456..44403
AA seq 315 aa
MIHAFLPPRAVVREVGLRDGLQSIARVLPTERKLEWIRGAHAAGQREIEVGSFVPAHLLP
QLADTAELLAYAKTLPGLFASVLVPNLKGAERAIAGEADLMIVPLSASHAHSLANLRKTP
DEVVAEVGRIRAARDAAGSKTLIDGGVGTAFGCTLQGRVDPDEVLRLMQALLDAGADRVS
LADTVGYADPAMVRSLFERALRIAGDRLWCGHFHDTRGMGLANAYAALEVGITRFDACLA
GIGGCPHAPGASGNVDTEDLVFMLQSMGVETGVDLPKLLDLRRRVAGWLDGETLQGTVWR
AGFPKTFAVVEGVAA
NT seq 948 nt   +upstreamnt  +downstreamnt
ttgattcacgccttcctgccgccccgcgcggtcgtccgcgaagtgggcctgcgcgacggc
ctccagagcatcgcccgcgtgctgcccaccgaacgcaagctcgaatggatccgcggcgcc
cacgcggccggccagcgcgagatcgaagtcggctctttcgtgccggcgcacctgctgccg
caactggccgacaccgccgaactgctggcttatgcgaagacgctgccgggcctgttcgcg
tcggtgctggtgcccaacctcaagggcgccgagcgtgccatcgcgggcgaggccgacctg
atgatcgtgccgctgtcggccagccatgcgcacagccttgccaacctgcgcaagacgccg
gacgaggtggtggccgaggtcggccgcatccgcgcggcacgcgacgcggcggggtcgaag
acgctgatcgacggcggcgtgggcacggccttcggctgcacgctgcagggccgtgtcgat
cccgacgaagtgctgcggctgatgcaggcgctgctcgacgccggcgccgaccgcgtgagc
ctggctgacaccgtcggctatgccgatccggcgatggtgcgcagcctgttcgagcgcgcg
ctgcgcatcgcgggcgaccggctgtggtgcggccatttccacgacacccgcggcatgggg
ctcgcgaacgcgtatgccgcgctggaggtcggcatcacgcgtttcgacgcctgcctggcc
ggcatcggcggctgcccgcacgcgcccggcgccagcggcaacgtcgacacggaggacctg
gtgttcatgctccagagcatgggcgtcgagaccggcgtcgacctgccgaagctgctcgac
ctgcgccgccgcgtggcgggctggctcgatggcgaaacgctgcagggcacggtgtggcgg
gcgggtttccccaagacctttgccgtggtcgagggagtcgccgcatga

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